RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 KRT15P19012 456 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 TAC1P20366 129 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 WDR4P57081 412 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 MARCH8Q5T0T0 291 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 ZNF467Q7Z7K2 595 aaPredicted RBP18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 ZNF410Q86VK4 478 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 FUKQ8N0W3 1084 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 DENND1AQ8TEH3 1009 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 PYROXD1Q8WU10 500 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 SMC6Q96SB8 1091 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 PLCD4Q9BRC7 762 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 ARL2BPQ9Y2Y0 163 aa18.81■□□□□ 0.6
PDLIM7-207ENST00000486828 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 SPAG7O75391 227 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 ASMTLO95671 621 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 RBP3P10745 1247 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 CDH6P55285 790 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 GEMIN4P57678 1058 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 NOMO1Q15155 1222 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 ZKSCAN8Q15776 578 aaPredicted RBP18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 GRIK4Q16099 956 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 MSS51Q4VC12 460 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 SH3PXD2AQ5TCZ1 1133 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 C2orf69Q8N8R5 385 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 FAM71DQ8N9W8 422 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 SPATA18Q8TC71 538 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 GRAMD1AQ96CP6 724 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 MAK16Q9BXY0 300 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 PRKAG3Q9UGI9 489 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 RABGEF1Q9UJ41 708 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 FOXN2P32314 431 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 ROR1Q01973 937 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 MMRN1Q13201 1228 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 TFDP2Q14188 446 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 MTFR1Q15390 333 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 GOLGA7BQ2TAP0 167 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 DCAF4L1Q3SXM0 396 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 FAM47CQ5HY64 1035 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 CGB2Q6NT52 195 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 SLC10A4Q96EP9 437 aa18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 PIWIL1Q96J94 861 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 WDR83Q9BRX9 315 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-207ENST00000486828 TCRBV7S3A2A0A539 114 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 PIK3R2O00459 728 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 TMEM63AO94886 807 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 SNAI1O95863 264 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 STIP1P31948 543 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 DPYSL3Q14195 570 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 C15orf59Q2T9L4 293 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 FAM133BQ5BKY9 247 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 ICE2Q659A1 982 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 CYB5D1Q6P9G0 228 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 C12orf29Q8N999 325 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 KIF9Q9HAQ2 790 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 PLEKHA5Q9HAU0 1116 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 XPO7Q9UIA9 1087 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 DERAQ9Y315 318 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 CITO14578 2027 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 TRPM7Q96QT4 1865 aa18.79■□□□□ 0.6
PDLIM7-207ENST00000486828 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 UNCXA6NJT0 531 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 DPYSL4O14531 572 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 STRNO43815 780 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 PRPSAP2O60256 369 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 HOXD8P13378 290 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 TSHRP16473 764 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 SSTR1P30872 391 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 SPARCL1Q14515 664 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 KLHL38Q2WGJ6 581 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 GALNTL6Q49A17 601 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 RAB6CQ53S08 254 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 DARS2Q6PI48 645 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 NPNTQ6UXI9 565 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 PDIK1LQ8N165 341 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 FBXO36Q8NEA4 188 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 RAB6CQ9H0N0 254 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 PDHXO00330 501 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 UBOX5O94941 541 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 BASP1P80723 227 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 RNASELQ05823 741 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 CCDC14Q49A88 953 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 PKDCCQ504Y2 493 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 PPP1R26Q5T8A7 1209 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 RGS9BPQ6ZS82 235 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 C3orf62Q6ZUJ4 267 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 C4orf33Q8N1A6 199 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 GBP7Q8N8V2 638 aaPredicted RBP18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 RNF157Q96PX1 679 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 PAIP2Q9BPZ3 127 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 DHRS4Q9BTZ2 278 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 ACSS3Q9H6R3 686 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 SSU72Q9NP77 194 aaKnown RBP18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 SLC45A1Q9Y2W3 748 aa18.78■□□□□ 0.6
PDLIM7-207ENST00000486828 TYROBPO43914 113 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 GRAP2O75791 330 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 NPTXRO95502 500 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 MMP3P08254 477 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 SETSIPP0DME0 302 aa18.77■□□□□ 0.6
PDLIM7-207ENST00000486828 RGS7P49802 495 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms