RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 HSPA12BQ96MM6 686 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 PNMA5Q96PV4 448 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 FUCA2Q9BTY2 467 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 PRDM16Q9HAZ2 1276 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 LRWD1Q9UFC0 647 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 PCDHA12Q9UN75 941 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 USP9XQ93008 2570 aaPredicted RBP10.55□□□□□ -0.72
SND1-213ENST00000486037 IGHV1OR15-9A0A0B4J2B8 117 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 PLK4O00444 970 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 PRR29P0C7W0 189 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 HAPLN1P10915 354 aaPredicted RBP10.55□□□□□ -0.72
SND1-213ENST00000486037 XRCC6P12956 609 aaKnown RBP eCLIP10.55□□□□□ -0.72
SND1-213ENST00000486037 GABRG2P18507 467 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 CYP11B2P19099 503 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 TXLNAP40222 546 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 KIR2DL1P43626 348 aaPredicted RBP10.55□□□□□ -0.72
SND1-213ENST00000486037 MRPS21P82921 87 aaKnown RBP10.55□□□□□ -0.72
SND1-213ENST00000486037 BNC1Q01954 994 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 VEPH1Q14D04 833 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 LMBRD2Q68DH5 695 aaPredicted RBP10.55□□□□□ -0.72
SND1-213ENST00000486037 DSTYKQ6XUX3 929 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 CATSPER3Q86XQ3 398 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 PGBD3Q8N328 593 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 TRIML1Q8N9V2 468 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 SETD7Q8WTS6 366 aaKnown RBP10.55□□□□□ -0.72
SND1-213ENST00000486037 ERCC4Q92889 916 aaPredicted RBP10.55□□□□□ -0.72
SND1-213ENST00000486037 EXOC4Q96A65 974 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 PLIN2Q99541 437 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 OXCT2Q9BYC2 517 aaPredicted RBP10.55□□□□□ -0.72
SND1-213ENST00000486037 ZCWPW1Q9H0M4 648 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 TRPC7Q9HCX4 862 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 CALCOCO1Q9P1Z2 691 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 HSFX1Q9UBD0 423 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 MAGED2Q9UNF1 606 aaPredicted RBP10.55□□□□□ -0.72
SND1-213ENST00000486037 BTBD3Q9Y2F9 522 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 STK24Q9Y6E0 443 aa10.55□□□□□ -0.72
SND1-213ENST00000486037 MYOFQ9NZM1 2061 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 SCAMP3O14828 347 aaKnown RBP10.54□□□□□ -0.72
SND1-213ENST00000486037 SLFN14P0C7P3 912 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 CXCL8P10145 99 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 MCF2P10911 925 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 KRT10P13645 584 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 PLCG1P19174 1290 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 TYMPP19971 482 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 DDX6P26196 483 aaKnown RBP eCLIP10.54□□□□□ -0.72
SND1-213ENST00000486037 TUFMP49411 452 aaKnown RBP10.54□□□□□ -0.72
SND1-213ENST00000486037 EFNA5P52803 228 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 MYO1EQ12965 1108 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 PNOCQ13519 176 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 ZRSR1Q15695 479 aaKnown RBP10.54□□□□□ -0.72
SND1-213ENST00000486037 TAF12Q16514 161 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 ECM1Q16610 540 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 RRAGBQ5VZM2 374 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 ELOA2Q8IYF1 753 aaPredicted RBP10.54□□□□□ -0.72
SND1-213ENST00000486037 GRAMD1CQ8IYS0 662 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 ARL14EPQ8N8R7 260 aaPredicted RBP10.54□□□□□ -0.72
SND1-213ENST00000486037 FAM181AQ8N9Y4 354 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 IQUBQ8NA54 791 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 SH3RF2Q8TEC5 729 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 SNX29Q8TEQ0 813 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 PAGE5Q96GU1 130 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 NACC1Q96RE7 527 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 RAB34Q9BZG1 259 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 HAPLN2Q9GZV7 340 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 TMLHEQ9NVH6 421 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 CCDC39Q9UFE4 941 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 USP25Q9UHP3 1055 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 HCN2Q9UL51 889 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 FNDC3AQ9Y2H6 1198 aaKnown RBP10.54□□□□□ -0.72
SND1-213ENST00000486037 ANAPC1Q9H1A4 1944 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 TEX15Q9BXT5 2789 aa10.54□□□□□ -0.72
SND1-213ENST00000486037 C2orf78A6NCI8 922 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 K7ERI5 159 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 CYP17A1P05093 508 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 STAT6P42226 847 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 KDSRQ06136 332 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 ZBTB6Q15916 424 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 TMEM119Q4V9L6 283 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 KRT79Q5XKE5 535 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 ARMCX5Q6P1M9 558 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 MPZL3Q6UWV2 235 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 RABEPKQ7Z6M1 372 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 MIB1Q86YT6 1006 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 PDCD7Q8N8D1 485 aaKnown RBP10.53□□□□□ -0.72
SND1-213ENST00000486037 MRPS31Q92665 395 aaKnown RBP10.53□□□□□ -0.72
SND1-213ENST00000486037 SENP8Q96LD8 212 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 PYM1Q9BRP8 204 aaKnown RBP10.53□□□□□ -0.72
SND1-213ENST00000486037 SLC6A17Q9H1V8 727 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 ABI2Q9NYB9 513 aaPredicted RBP10.53□□□□□ -0.72
SND1-213ENST00000486037 GCNT4Q9P109 453 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 ZMYM5Q9UJ78 669 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 CYP8B1Q9UNU6 501 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 PHLPP2Q6ZVD8 1323 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 KNTC1P50748 2209 aa10.53□□□□□ -0.72
SND1-213ENST00000486037 MYH11P35749 1972 aa10.52□□□□□ -0.72
SND1-213ENST00000486037 ARHGEF35A5YM69 484 aa10.52□□□□□ -0.73
SND1-213ENST00000486037 CAPN9O14815 690 aa10.52□□□□□ -0.73
SND1-213ENST00000486037 KAT7O95251 611 aa10.52□□□□□ -0.73
SND1-213ENST00000486037 CASP1P29466 404 aa10.52□□□□□ -0.73
SND1-213ENST00000486037 CCT6AP40227 531 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms