RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ST13P5Q8NFI4 369 aaPredicted RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 FAM3CQ92520 227 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 ATOH1Q92858 354 aaPredicted RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 USP13Q92995 863 aaPredicted RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 SMARCE1Q969G3 411 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 MYLPFQ96A32 169 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 RSPRY1Q96DX4 576 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 CEP63Q96MT8 703 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 B3GNT5Q9BYG0 378 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 FAM126AQ9BYI3 521 aaPredicted RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 UBXN6Q9BZV1 441 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 METTL14Q9HCE5 456 aaKnown RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 CHMP5Q9NZZ3 219 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 NXF1Q9UBU9 619 aaKnown RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 MAPK8IP1Q9UQF2 711 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 MTF2Q9Y483 593 aaPredicted RBP7.45□□□□□ -1.22
VPS50-218ENST00000485994 NCANO14594 1321 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 USP34Q70CQ2 3546 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 ATG2BQ96BY7 2078 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 VPS13AQ96RL7 3174 aa7.45□□□□□ -1.22
VPS50-218ENST00000485994 TICRRQ7Z2Z1 1910 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 MYOFQ9NZM1 2061 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 F8VP50 259 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 TULP1O00294 542 aaPredicted RBP7.44□□□□□ -1.22
VPS50-218ENST00000485994 TRDMT1O14717 391 aaKnown RBP7.44□□□□□ -1.22
VPS50-218ENST00000485994 PAPSS2O95340 614 aaPredicted RBP7.44□□□□□ -1.22
VPS50-218ENST00000485994 PRAMEF12O95522 483 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 OLFM2O95897 454 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 DCNP07585 359 aaKnown RBP7.44□□□□□ -1.22
VPS50-218ENST00000485994 ZDHHC11BP0C7U3 371 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 EPB41P11171 864 aaKnown RBP7.44□□□□□ -1.22
VPS50-218ENST00000485994 CHRNB1P11230 501 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 HDCP19113 662 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 RFX1P22670 979 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 TARSP26639 723 aaKnown RBP7.44□□□□□ -1.22
VPS50-218ENST00000485994 ANXA13P27216 316 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 HOXA6P31267 233 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 ASPAP45381 313 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 NDST1P52848 882 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 PSMC1P62191 440 aaKnown RBP7.44□□□□□ -1.22
VPS50-218ENST00000485994 SLC7A9P82251 487 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 CYP4F8P98187 520 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 AMPD2Q01433 879 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 CYP27A1Q02318 531 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 STIM1Q13586 685 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 MORC3Q14149 939 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 UBXN2BQ14CS0 331 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 ITPRIPL2Q3MIP1 535 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 MDH1BQ5I0G3 518 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 DGKKQ5KSL6 1271 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 SDHAF4Q5VUM1 108 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 SCN4BQ8IWT1 228 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 MAML2Q8IZL2 1156 aaPredicted RBP7.44□□□□□ -1.22
VPS50-218ENST00000485994 FBXL13Q8NEE6 735 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 PDZD8Q8NEN9 1154 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 CSGALNACT1Q8TDX6 532 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 TATDN2Q93075 761 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 HNRNPABQ99729 332 aaKnown RBP7.44□□□□□ -1.22
VPS50-218ENST00000485994 TSG101Q99816 390 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 IMPG2Q9BZV3 1241 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 FOXQ1Q9C009 403 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 DNAI2Q9GZS0 605 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 SDCBP2Q9H190 292 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 CHRDQ9H2X0 955 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 DPEP3Q9H4B8 488 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 SMYD3Q9H7B4 428 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 PNPLA8Q9NP80 782 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 GKN1Q9NS71 199 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 RAB20Q9NX57 234 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 TRPM5Q9NZQ8 1165 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 ARHGAP26Q9UNA1 814 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 MAGED2Q9UNF1 606 aaPredicted RBP7.44□□□□□ -1.22
VPS50-218ENST00000485994 PIAS3Q9Y6X2 628 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 GVINP1Q7Z2Y8 2422 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 ATP8B3O60423 1300 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 WDR87Q6ZQQ6 2873 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 MYO15AQ9UKN7 3530 aa7.44□□□□□ -1.22
VPS50-218ENST00000485994 TRAV19A0A0A6YYK7 116 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 ZNF840PA6NDX5 716 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 PSMA7O14818 248 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 P4HA2O15460 535 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 LAMTOR5O43504 91 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 KINO60870 393 aaKnown RBP7.43□□□□□ -1.22
VPS50-218ENST00000485994 CILPO75339 1184 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 OAS1P00973 400 aaKnown RBP7.43□□□□□ -1.22
VPS50-218ENST00000485994 SP9P0CG40 484 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 PRKCSHP14314 528 aaPredicted RBP7.43□□□□□ -1.22
VPS50-218ENST00000485994 CD72P21854 359 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 YWHAQP27348 245 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 GCLMP48507 274 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 TUBP50607 506 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 NRLP54845 237 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 MARSP56192 900 aaKnown RBP7.43□□□□□ -1.22
VPS50-218ENST00000485994 PRSS12P56730 875 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 USP46P62068 366 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 UBE2HP62256 183 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 RUNX3Q13761 415 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 PDGFRLQ15198 375 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 ZNF77Q15935 545 aa7.43□□□□□ -1.22
VPS50-218ENST00000485994 CCDC142Q17RM4 750 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms