RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 A8MVJ9 347 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 E7EWF7 191 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 H3BQV1 296 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 MEFVO15553 781 aaPredicted RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 AHCYL1O43865 530 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 CTNND1O60716 968 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 PQBP1O60828 265 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 KINO60870 393 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 DGKIO75912 1065 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 PLATP00750 562 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 LTFP02788 710 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 SLPIP03973 132 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 CSF1RP07333 972 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 C8BP07358 591 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 HSPD1P10809 573 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 PYGMP11217 842 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 FDPSP14324 419 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 GNAT2P19087 354 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 PTGS1P23219 599 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 PDIA3P30101 505 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 HADHAP40939 763 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 STAT5AP42229 794 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 EPS15P42566 896 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 MTHFRP42898 656 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 GDF5P43026 501 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 KIF11P52732 1056 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 SLC12A2P55011 1212 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 GSDMDP57764 484 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 RPL11P62913 178 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 AIMP1Q12904 312 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 TRDNQ13061 729 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 SLC39A6Q13433 755 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 MEA1Q16626 185 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 ABCB5Q2M3G0 1257 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 SLC10A6Q3KNW5 377 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 CCDC38Q502W7 563 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 CAVIN4Q5BKX8 364 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 FAM173BQ6P4H8 233 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 C11orf88Q6PI97 169 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 CD300LDQ6UXZ3 194 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 ARMC9Q7Z3E5 817 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 SRGAP1Q7Z6B7 1085 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 ZER1Q7Z7L7 766 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 LRRC8AQ8IWT6 810 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 DHX40Q8IX18 779 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 PPIL6Q8IXY8 311 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 TTC5Q8N0Z6 440 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 KRT222Q8N1A0 295 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 ZNF619Q8N2I2 560 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 LRRC71Q8N4P6 559 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 TTC9BQ8N6N2 239 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 NAT8LQ8N9F0 302 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 ZBTB38Q8NAP3 1195 aaPredicted RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 LINC00301Q8NCQ3 95 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 ZNF540Q8NDQ6 660 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 TOR1AIP2Q8NFQ8 470 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 KLHDC4Q8TBB5 520 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 KCNG4Q8TDN1 519 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 ADAMTS18Q8TE60 1221 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 COG1Q8WTW3 980 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 CACTINQ8WUQ7 758 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 UCMAQ8WVF2 138 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 CDCA5Q96FF9 252 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 DHTKD1Q96HY7 919 aaPredicted RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 FUBP3Q96I24 572 aaKnown RBP eCLIP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 C16orf45Q96MC5 204 aaPredicted RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 COG8Q96MW5 612 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 USP28Q96RU2 1077 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 GORASP1Q9BQQ3 440 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 GPATCH1Q9BRR8 931 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 MMTAG2Q9BU76 263 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 MENTQ9BUN1 341 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 TRIM5Q9C035 493 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 NAT10Q9H0A0 1025 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 SIL1Q9H173 461 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 FAM204AQ9H8W3 233 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 TRPV4Q9HBA0 871 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 UBN1Q9NPG3 1134 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 NMRK2Q9NPI5 230 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 OLA1Q9NTK5 396 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 INTS10Q9NVR2 710 aaKnown RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 CAB39Q9Y376 341 aaPredicted RBP4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 TJP1Q07157 1748 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 NUP188Q5SRE5 1749 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 KCPQ6ZWJ8 1503 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 MAST3O60307 1309 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 ZMYM6O95789 1325 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 NEDD4P46934 1319 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 NID2Q14112 1375 aa4.31□□□□□ -1.72
PRPF38B-205ENST00000485810 DDX60Q8IY21 1712 aaKnown RBP4.3□□□□□ -1.72
PRPF38B-205ENST00000485810 ARPC4-TTLL3A0A0A6YYG9 625 aa4.3□□□□□ -1.72
PRPF38B-205ENST00000485810 A0A1W2PQU0 124 aa4.3□□□□□ -1.72
PRPF38B-205ENST00000485810 CCDC169A6NNP5 214 aa4.3□□□□□ -1.72
PRPF38B-205ENST00000485810 F8VZ95 297 aa4.3□□□□□ -1.72
PRPF38B-205ENST00000485810 GOLGA6L19H0YKK7 550 aa4.3□□□□□ -1.72
PRPF38B-205ENST00000485810 EIF3FO00303 357 aaPredicted RBP4.3□□□□□ -1.72
PRPF38B-205ENST00000485810 CDKL5O76039 1030 aa4.3□□□□□ -1.72
PRPF38B-205ENST00000485810 SMC2O95347 1197 aa4.3□□□□□ -1.72
PRPF38B-205ENST00000485810 ZBTB7AO95365 584 aa4.3□□□□□ -1.72
PRPF38B-205ENST00000485810 HSPA1AP0DMV8 641 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms