RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 CYP2S1Q96SQ9 504 aa12.55□□□□□ -0.4
APTX-227ENST00000485479 CSNK1G1Q9HCP0 422 aa12.55□□□□□ -0.4
APTX-227ENST00000485479 TRPC7Q9HCX4 862 aa12.55□□□□□ -0.4
APTX-227ENST00000485479 HESX1Q9UBX0 185 aa12.55□□□□□ -0.4
APTX-227ENST00000485479 NUDT5Q9UKK9 219 aa12.55□□□□□ -0.4
APTX-227ENST00000485479 NCANO14594 1321 aa12.55□□□□□ -0.4
APTX-227ENST00000485479 ANAPC1Q9H1A4 1944 aa12.55□□□□□ -0.4
APTX-227ENST00000485479 GABBR2O75899 941 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 PAPLNO95428 1278 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 MMEP08473 750 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 LCP1P13796 627 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 CYP11B1P15538 503 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 BCAT1P54687 386 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 C2CD6Q53TS8 623 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 LCLAT1Q6UWP7 414 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 NUP93Q8N1F7 819 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 MAB21L3Q8N8X9 362 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 BAP1Q92560 729 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 FBXO32Q969P5 355 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 NECTIN4Q96NY8 510 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 RPP25Q9BUL9 199 aaKnown RBP12.54□□□□□ -0.4
APTX-227ENST00000485479 ST7Q9NRC1 585 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 GMIPQ9P107 970 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 LIMD1Q9UGP4 676 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 MYO10Q9HD67 2058 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 DENND4CQ5VZ89 1909 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 SCAMP3O14828 347 aaKnown RBP12.54□□□□□ -0.4
APTX-227ENST00000485479 F11P03951 625 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 USP17L7P0C7H9 530 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 SOX5P35711 763 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 EPHA5P54756 1037 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 PTK2Q05397 1052 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 ADIGQ0VDE8 80 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 BST2Q10589 180 aaKnown RBP12.54□□□□□ -0.4
APTX-227ENST00000485479 PKDCCQ504Y2 493 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 GPR158Q5T848 1215 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 ADHFE1Q8IWW8 467 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 TDRD5Q8NAT2 981 aaKnown RBP12.54□□□□□ -0.4
APTX-227ENST00000485479 C1orf131Q8NDD1 294 aaKnown RBP12.54□□□□□ -0.4
APTX-227ENST00000485479 EPS8L1Q8TE68 723 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 FGF14Q92915 247 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 SPATA17Q96L03 361 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 TRIM5Q9C035 493 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 TTYH3Q9C0H2 523 aa12.54□□□□□ -0.4
APTX-227ENST00000485479 A0A1W2PQC6 194 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 VIPR2P41587 438 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 PDE6CP51160 858 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 CNGA2Q16280 664 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 PARM1Q6UWI2 310 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 KHSRPQ92945 711 aaKnown RBP eCLIP12.53□□□□□ -0.46e-6■□□□□ 9.5
APTX-227ENST00000485479 KXD1Q9BQD3 176 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 MIS12Q9H081 205 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 OSER1Q9NX31 292 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 CCL26Q9Y258 94 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 ASB3Q9Y575 518 aa12.53□□□□□ -0.4
APTX-227ENST00000485479 PRAMEF12O95522 483 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 GYPCP04921 128 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 SKILP12757 684 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 LAMP2P13473 410 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 RFX1P22670 979 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 YWHAQP27348 245 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 STAT1P42224 750 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 GPD2P43304 727 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 TKTL1P51854 596 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 PUS10Q3MIT2 529 aaKnown RBP12.52□□□□□ -0.4
APTX-227ENST00000485479 RTL10Q7L3V2 364 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 WDTC1Q8N5D0 677 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 ZSCAN18Q8TBC5 510 aaPredicted RBP12.52□□□□□ -0.4
APTX-227ENST00000485479 SLC35F5Q8WV83 523 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 DDX1Q92499 740 aaKnown RBP12.52□□□□□ -0.4
APTX-227ENST00000485479 PIWIL1Q96J94 861 aaKnown RBP12.52□□□□□ -0.4
APTX-227ENST00000485479 FAM81BQ96LP2 452 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 UHRF1Q96T88 793 aaPredicted RBP12.52□□□□□ -0.4
APTX-227ENST00000485479 SLC46A2Q9BY10 475 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 ULBP1Q9BZM6 244 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 FAM124BQ9H5Z6 455 aaPredicted RBP12.52□□□□□ -0.4
APTX-227ENST00000485479 NMUR1Q9HB89 426 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 NOCTQ9UK39 431 aaKnown RBP12.52□□□□□ -0.4
APTX-227ENST00000485479 CDH7Q9ULB5 785 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 FAM50BQ9Y247 325 aa12.52□□□□□ -0.4
APTX-227ENST00000485479 XPO1O14980 1071 aaKnown RBP12.52□□□□□ -0.41
APTX-227ENST00000485479 MDM4O15151 490 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 TBX18O95935 607 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 POU2F2P09086 479 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 CASP14P31944 242 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 KRT9P35527 623 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 KIF11P52732 1056 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 FAM78AQ5JUQ0 283 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 ARL14EPQ8N8R7 260 aaPredicted RBP12.52□□□□□ -0.41
APTX-227ENST00000485479 RIN3Q8TB24 985 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 RSPRY1Q96DX4 576 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 MYRFLQ96LU7 910 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 CPXM1Q96SM3 734 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 DNAI2Q9GZS0 605 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 CCSER2Q9H7U1 834 aa12.52□□□□□ -0.41
APTX-227ENST00000485479 SEPT11Q9NVA2 429 aaKnown RBP12.52□□□□□ -0.41
APTX-227ENST00000485479 SMPD4Q9NXE4 827 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms