RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SPAG17Q6Q759 2223 aa20.49■□□□□ 0.87
COL27A1-205ENST00000485397 EML5Q05BV3 1969 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 K7EQS6 105 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 STAU1O95793 577 aaKnown RBP20.48■□□□□ 0.87
COL27A1-205ENST00000485397 OLFM2O95897 454 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 CYP17A1P05093 508 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 KCNA4P22459 653 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 PPP3CCP48454 512 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 CDH8P55286 799 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 SEC13P55735 322 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 KNOP1Q1ED39 458 aaKnown RBP20.48■□□□□ 0.87
COL27A1-205ENST00000485397 PLA2G2CQ5R387 149 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 TDRD10Q5VZ19 366 aaKnown RBP20.48■□□□□ 0.87
COL27A1-205ENST00000485397 C12orf56Q8IXR9 622 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 B3GALNT2Q8NCR0 500 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 USP33Q8TEY7 942 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 ELMO3Q96BJ8 720 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 ELOVL4Q9GZR5 314 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 SMYD3Q9H7B4 428 aa20.48■□□□□ 0.87
COL27A1-205ENST00000485397 TPRP12270 2363 aaKnown RBP20.48■□□□□ 0.87
COL27A1-205ENST00000485397 PVALEFA0A1B0GWK0 134 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 EXOC3O60645 756 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 PHACTR2O75167 634 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 F13A1P00488 732 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 OAS1P00973 400 aaKnown RBP20.47■□□□□ 0.87
COL27A1-205ENST00000485397 ZSCAN22P10073 491 aaPredicted RBP20.47■□□□□ 0.87
COL27A1-205ENST00000485397 ATICP31939 592 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 ME1P48163 572 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 DGKEP52429 567 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 C2orf27AQ580R0 203 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 RESP18Q5W5W9 173 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 IL31Q6EBC2 164 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 ADGRG2Q8IZP9 1017 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 SNX21Q969T3 373 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 FAM13BQ9NYF5 915 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 CGNQ9P2M7 1197 aaKnown RBP20.47■□□□□ 0.87
COL27A1-205ENST00000485397 EBF1Q9UH73 591 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 INVSQ9Y283 1065 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 PCDHGA5Q9Y5G8 931 aa20.47■□□□□ 0.87
COL27A1-205ENST00000485397 MBL2P11226 248 aaPredicted RBP20.46■□□□□ 0.87
COL27A1-205ENST00000485397 YWHAQP27348 245 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 MPLP40238 635 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 SLC6A11P48066 632 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 LIMK1P53667 647 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 BIRC3Q13489 604 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 DHCR24Q15392 516 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 NUP93Q8N1F7 819 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 TSTD1Q8NFU3 115 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 SYAP1Q96A49 352 aaPredicted RBP20.46■□□□□ 0.87
COL27A1-205ENST00000485397 SLITRK1Q96PX8 696 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 KCNK16Q96T55 309 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 CFAP97Q9P2B7 532 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 SERTAD1Q9UHV2 236 aa20.46■□□□□ 0.87
COL27A1-205ENST00000485397 HELZP42694 1942 aaKnown RBP20.46■□□□□ 0.87
COL27A1-205ENST00000485397 MYO16Q9Y6X6 1858 aa20.45■□□□□ 0.86
COL27A1-205ENST00000485397 LRRIQ3A6PVS8 624 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-205ENST00000485397 MESP2Q0VG99 397 aa20.45■□□□□ 0.86
COL27A1-205ENST00000485397 TCEAL6Q6IPX3 200 aa20.45■□□□□ 0.86
COL27A1-205ENST00000485397 PAQR9Q6ZVX9 377 aa20.45■□□□□ 0.86
COL27A1-205ENST00000485397 SFTPA1Q8IWL2 248 aa20.45■□□□□ 0.86
COL27A1-205ENST00000485397 CCDC33Q8N5R6 958 aa20.45■□□□□ 0.86
COL27A1-205ENST00000485397 CCDC26Q8TAB7 109 aa20.45■□□□□ 0.86
COL27A1-205ENST00000485397 TCEAL3Q969E4 200 aa20.45■□□□□ 0.86
COL27A1-205ENST00000485397 FBXO32Q969P5 355 aa20.45■□□□□ 0.86
COL27A1-205ENST00000485397 TPSD1Q9BZJ3 242 aa20.45■□□□□ 0.86
COL27A1-205ENST00000485397 CHORDC1Q9UHD1 332 aaPredicted RBP20.45■□□□□ 0.86
COL27A1-205ENST00000485397 TM4SF5O14894 197 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 KLRC4O43908 158 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 RHOBTB1O94844 696 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 CLSTN1O94985 981 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 C4BPAP04003 597 aaKnown RBP20.44■□□□□ 0.86
COL27A1-205ENST00000485397 STK4Q13043 487 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 ELF2Q15723 593 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 ZNF699Q32M78 642 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 ZNF667Q5HYK9 610 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 STPG1Q5TH74 334 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 RHBDF2Q6PJF5 856 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 SCARA5Q6ZMJ2 495 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 FAM35AQ86V20 835 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 C12orf40Q86WS4 652 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 KIAA1958Q8N8K9 716 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 SCAMP5Q8TAC9 235 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 PARD3BQ8TEW8 1205 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 MED10Q9BTT4 135 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 SDCBP2Q9H190 292 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 VRTNQ9H8Y1 702 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 VPS45Q9NRW7 570 aa20.44■□□□□ 0.86
COL27A1-205ENST00000485397 KIAA1549LQ6ZVL6 1849 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 SLC9A3R1O14745 358 aaPredicted RBP20.43■□□□□ 0.86
COL27A1-205ENST00000485397 RTN3O95197 1032 aaPredicted RBP20.43■□□□□ 0.86
COL27A1-205ENST00000485397 VNN1O95497 513 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 HNRNPLP14866 589 aaKnown RBP eCLIP20.43■□□□□ 0.861e-22■□□□□ 11.3
COL27A1-205ENST00000485397 GBP1P32455 592 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 CREB5Q02930 508 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 NCOA4Q13772 614 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 PKP1Q13835 747 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 ANO7Q6IWH7 933 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 CEP57L1Q8IYX8 460 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 KIAA0895Q8NCT3 520 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 GOLGA5Q8TBA6 731 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms