RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 CSNK1G1Q9HCP0 422 aa20.24■□□□□ 0.83
SNX17-206ENST00000484886 HEBP1Q9NRV9 189 aa20.24■□□□□ 0.83
SNX17-206ENST00000484886 ZNF840PA6NDX5 716 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 KCNJ18B7U540 433 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 TNFRSF10BO14763 440 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 CHADO15335 359 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 HDCP19113 662 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 AVPR2P30518 371 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 FCHO2Q0JRZ9 810 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 KCNJ12Q14500 433 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 MAN2A1Q16706 1144 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 GOLGA7BQ2TAP0 167 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 ARHGAP29Q52LW3 1261 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 IER5LQ5T953 404 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 CWF19L1Q69YN2 538 aaKnown RBP20.23■□□□□ 0.83
SNX17-206ENST00000484886 CAVIN1Q6NZI2 390 aaKnown RBP20.23■□□□□ 0.83
SNX17-206ENST00000484886 CC2D1AQ6P1N0 951 aaPredicted RBP20.23■□□□□ 0.83
SNX17-206ENST00000484886 TPRG1Q6ZUI0 275 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 ZFYVE19Q96K21 471 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 LRRC3BQ96PB8 259 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 SLC22A12Q96S37 553 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 DUSP16Q9BY84 665 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 FBXO44Q9H4M3 255 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 COMMD8Q9NX08 183 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 GMIPQ9P107 970 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 NFE2L3Q9Y4A8 694 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 ZDBF2Q9HCK1 2354 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 TICRRQ7Z2Z1 1910 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 ANAPC1Q9H1A4 1944 aa20.23■□□□□ 0.83
SNX17-206ENST00000484886 ACO1P21399 889 aaKnown RBP20.22■□□□□ 0.83
SNX17-206ENST00000484886 CLCN5P51795 746 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 PLCB2Q00722 1185 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 GCNT1Q02742 428 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 PRKCQQ04759 706 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 ARHGAP17Q68EM7 881 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 GPRIN1Q7Z2K8 1008 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 UBR7Q8N806 425 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 OVCA2Q8WZ82 227 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 TUBGCP2Q9BSJ2 902 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 UBE2TQ9NPD8 197 aaPredicted RBP20.22■□□□□ 0.83
SNX17-206ENST00000484886 SAMSN1Q9NSI8 373 aaKnown RBP20.22■□□□□ 0.83
SNX17-206ENST00000484886 TMEM63CQ9P1W3 806 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 HESX1Q9UBX0 185 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 CHORDC1Q9UHD1 332 aaPredicted RBP20.22■□□□□ 0.83
SNX17-206ENST00000484886 PATJQ8NI35 1801 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 MYO16Q9Y6X6 1858 aa20.22■□□□□ 0.83
SNX17-206ENST00000484886 KRT5P13647 590 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 AOC1P19801 751 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 KPNA1P52294 538 aaPredicted RBP20.21■□□□□ 0.83
SNX17-206ENST00000484886 ZNF268Q14587 947 aaPredicted RBP20.21■□□□□ 0.83
SNX17-206ENST00000484886 UBXN2BQ14CS0 331 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 EXOC3L4Q17RC7 722 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 PHLDB3Q6NSJ2 640 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 TRIM65Q6PJ69 517 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 C11orf57Q6ZUT1 292 aaPredicted RBP20.21■□□□□ 0.83
SNX17-206ENST00000484886 TMEM105Q8N8V8 129 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 RBBP8NLQ8NC74 664 aaPredicted RBP20.21■□□□□ 0.83
SNX17-206ENST00000484886 TTC8Q8TAM2 541 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 ENOX1Q8TC92 643 aaKnown RBP20.21■□□□□ 0.83
SNX17-206ENST00000484886 FOXQ1Q9C009 403 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 NACA2Q9H009 215 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 PIAS3Q9Y6X2 628 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 KMT2EQ8IZD2 1858 aa20.21■□□□□ 0.83
SNX17-206ENST00000484886 COL4A3Q01955 1670 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 KANSL1LA0AUZ9 987 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 PAEPP09466 180 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 MBL2P11226 248 aaPredicted RBP20.2■□□□□ 0.82
SNX17-206ENST00000484886 VDRP11473 427 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 PFKLP17858 780 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 SLC9A1P19634 815 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 CD72P21854 359 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 BCAT1P54687 386 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 MFAP3P55082 362 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 STARD6P59095 220 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 VWA3BQ502W6 1294 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 HECTD3Q5T447 861 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 ANKRD52Q8NB46 1076 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 SH3RF2Q8TEC5 729 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 KREMEN1Q96MU8 473 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 NDST4Q9H3R1 872 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 PNPLA8Q9NP80 782 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 TLR8Q9NR97 1041 aaKnown RBP20.2■□□□□ 0.82
SNX17-206ENST00000484886 GKN1Q9NS71 199 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 SMPD4Q9NXE4 827 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 TSPAN16Q9UKR8 245 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 KIAA1257Q9ULG3 409 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 SIT1Q9Y3P8 196 aa20.2■□□□□ 0.82
SNX17-206ENST00000484886 GTPBP10A4D1E9 387 aaKnown RBP20.19■□□□□ 0.82
SNX17-206ENST00000484886 HHLA1C9JL84 531 aa20.19■□□□□ 0.82
SNX17-206ENST00000484886 CYP26A1O43174 497 aa20.19■□□□□ 0.82
SNX17-206ENST00000484886 PI15O43692 258 aa20.19■□□□□ 0.82
SNX17-206ENST00000484886 TPM2P07951 284 aa20.19■□□□□ 0.82
SNX17-206ENST00000484886 EEF1GP26641 437 aaKnown RBP20.19■□□□□ 0.82
SNX17-206ENST00000484886 USP8P40818 1118 aa20.19■□□□□ 0.82
SNX17-206ENST00000484886 TYRO3Q06418 890 aa20.19■□□□□ 0.82
SNX17-206ENST00000484886 MTF1Q14872 753 aa20.19■□□□□ 0.82
SNX17-206ENST00000484886 TCP11X2Q5H9J9 407 aa20.19■□□□□ 0.82
SNX17-206ENST00000484886 ZNF852Q6ZMS4 543 aa20.19■□□□□ 0.82
SNX17-206ENST00000484886 FAM81BQ96LP2 452 aa20.19■□□□□ 0.82
SNX17-206ENST00000484886 TRPV5Q9NQA5 729 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms