RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 NT5DC4Q86YG4 428 aa13.66□□□□□ -0.22
DNMT3A-213ENST00000484184 ZSWIM2Q8NEG5 633 aa13.66□□□□□ -0.22
DNMT3A-213ENST00000484184 FAM84AQ96KN4 292 aa13.66□□□□□ -0.22
DNMT3A-213ENST00000484184 PANK2Q9BZ23 570 aa13.66□□□□□ -0.22
DNMT3A-213ENST00000484184 ST6GALNAC4Q9H4F1 302 aa13.66□□□□□ -0.22
DNMT3A-213ENST00000484184 ZDHHC4Q9NPG8 344 aa13.66□□□□□ -0.22
DNMT3A-213ENST00000484184 CCDC39Q9UFE4 941 aa13.66□□□□□ -0.22
DNMT3A-213ENST00000484184 SLC6A14Q9UN76 642 aa13.66□□□□□ -0.22
DNMT3A-213ENST00000484184 H0Y626 953 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 MAP3K13O43283 966 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 ATP2C2O75185 946 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 KAT7O95251 611 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 TRIM16O95361 564 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 OLFM2O95897 454 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 F13A1P00488 732 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 KRT18P05783 430 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 PDIA4P13667 645 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 HOXD12P35452 270 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 MAGEA11P43364 429 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 USP46P62068 366 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 HSF5Q4G112 596 aaPredicted RBP13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 SLFN12LQ6IEE8 588 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 RHBDF2Q6PJF5 856 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 FILIP1Q7Z7B0 1213 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 SCN4BQ8IWT1 228 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 PHTF2Q8N3S3 785 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 KIAA1958Q8N8K9 716 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 KRI1Q8N9T8 703 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 FSIP1Q8NA03 581 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 OR2I1PQ8NGU4 316 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 RAD54LQ92698 747 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 FUBP3Q96I24 572 aaKnown RBP eCLIP13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 SPACA7Q96KW9 195 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 ZNF560Q96MR9 790 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 RNF38Q9H0F5 515 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 GDAP2Q9NXN4 497 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 AGAP1Q9UPQ3 857 aa13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 GOLGA4Q13439 2230 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-213ENST00000484184 CABIN1Q9Y6J0 2220 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 ZNF840PA6NDX5 716 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 SCAMP3O14828 347 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 SPTLC2O15270 562 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 HUS1O60921 280 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 GJB3O75712 270 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 PPP1R37O75864 691 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 IL18RAPO95256 599 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 ITGB3P05106 788 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 CFIP05156 583 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 SERPINF2P08697 491 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 PFKLP17858 780 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 TIE1P35590 1138 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 DDIT3P35638 169 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 EIF2DP41214 584 aaKnown RBP13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 DPP6P42658 865 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 NASPP49321 788 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 SLC7A9P82251 487 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 MYL7Q01449 175 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 SCAPQ12770 1279 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 DUOXA1Q1HG43 343 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 RRAGBQ5VZM2 374 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 C19orf48Q6RUI8 117 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 LIMS2Q7Z4I7 341 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 TMEM86AQ8N2M4 240 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 LINC00301Q8NCQ3 95 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 SPATA18Q8TC71 538 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 HMGB4Q8WW32 186 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 SPATA17Q96L03 361 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 PNKPQ96T60 521 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 STRA6Q9BX79 667 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 ZHX3Q9H4I2 956 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 HCN2Q9UL51 889 aa13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 CIZ1Q9ULV3 898 aaPredicted RBP13.64□□□□□ -0.23
DNMT3A-213ENST00000484184 TCRBV21S2A2A0A5A6 115 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 MYMKA6NI61 221 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 TXLNAP40222 546 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 KCNA1Q09470 495 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 ZNF423Q2M1K9 1284 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 SOWAHAQ2M3V2 549 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 EOGTQ5NDL2 527 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 PDZD3Q86UT5 571 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 SPATA2LQ8IUW3 424 aaPredicted RBP13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 BRSK2Q8IWQ3 736 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 HDDC3Q8N4P3 179 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 MINDY1Q8N5J2 469 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 LRRC52Q8N7C0 313 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 LARP4BQ92615 738 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 CAMK1GQ96NX5 476 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 TTLL2Q9BWV7 592 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 GTPBP2Q9BX10 602 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 CD248Q9HCU0 757 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 POLMQ9NP87 494 aaPredicted RBP13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 DNAAF2Q9NVR5 837 aaKnown RBP13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 BCCIPQ9P287 314 aaKnown RBP eCLIP13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 SIX4Q9UIU6 781 aa13.63□□□□□ -0.23
DNMT3A-213ENST00000484184 KNTC1P50748 2209 aa13.62□□□□□ -0.23
DNMT3A-213ENST00000484184 ARHGAP33O14559 1287 aa13.62□□□□□ -0.23
DNMT3A-213ENST00000484184 OPHN1O60890 802 aa13.62□□□□□ -0.23
DNMT3A-213ENST00000484184 PPP6R2O75170 966 aa13.62□□□□□ -0.23
DNMT3A-213ENST00000484184 APODP05090 189 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms