RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TMEM191BP0C7N4 346 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 TMEM253P0C7T8 217 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 PNMA6AP0CW24 399 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-216ENST00000484087 KRT5P13647 590 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 AMPD2Q01433 879 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 POU5F1Q01860 360 aaKnown RBP7.35□□□□□ -1.23
BRCA1-216ENST00000484087 TRPC3Q13507 836 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 DUOXA2Q1HG44 320 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 PUS10Q3MIT2 529 aaKnown RBP7.35□□□□□ -1.23
BRCA1-216ENST00000484087 CTXN3Q4LDR2 81 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 CES5AQ6NT32 575 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 PPP1R2P3Q6NXS1 205 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 DSTYKQ6XUX3 929 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 RNF19BQ6ZMZ0 732 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 C15orf39Q6ZRI6 1047 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 GRASPQ7Z6J2 395 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-216ENST00000484087 GPR149Q86SP6 731 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 ZNF677Q86XU0 584 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 FAM71AQ8IYT1 594 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 KMT2EQ8IZD2 1858 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 C1orf127Q8N9H9 656 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 BEST2Q8NFU1 509 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 OR10T2Q8NGX3 314 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 UBE2Q2Q8WVN8 375 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 SHC3Q92529 594 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 TSC1Q92574 1164 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 SEMA4DQ92854 862 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 ANKRD36BP1Q96IX9 119 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 SUSD3Q96L08 255 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 MYADMQ96S97 322 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 GPR88Q9GZN0 384 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 PDCL3Q9H2J4 239 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.35□□□□□ -1.234e-6■■■■■ 85.3
BRCA1-216ENST00000484087 DPP3Q9NY33 737 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 FNIP2Q9P278 1114 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 SIX4Q9UIU6 781 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 SNX12Q9UMY4 172 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 CAPN6Q9Y6Q1 641 aa7.35□□□□□ -1.23
BRCA1-216ENST00000484087 CLUHO75153 1309 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 TMCO5BA8MYB1 307 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 PIRO00625 290 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 CYP26A1O43174 497 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 NARSO43776 548 aaKnown RBP7.34□□□□□ -1.23
BRCA1-216ENST00000484087 RTN2O75298 545 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 PALMO75781 387 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 KRT19P08727 400 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 GZMAP12544 262 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 CPB1P15086 417 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 CYP11B1P15538 503 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 GJA1P17302 382 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 HOXB8P17481 243 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-216ENST00000484087 ACAT1P24752 427 aaKnown RBP7.34□□□□□ -1.23
BRCA1-216ENST00000484087 MCM3P25205 808 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 GALCP54803 685 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 LILRA4P59901 499 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 YWHAEP62258 255 aaKnown RBP7.34□□□□□ -1.23
BRCA1-216ENST00000484087 CDR2Q01850 454 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 ITIH3Q06033 890 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 ELAVL2Q12926 359 aaKnown RBP7.34□□□□□ -1.23
BRCA1-216ENST00000484087 NCOA4Q13772 614 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 RPS6KA1Q15418 735 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 SLC5A9Q2M3M2 681 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 PPM1LQ5SGD2 360 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 LIN9Q5TKA1 542 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 TDRD10Q5VZ19 366 aaKnown RBP7.34□□□□□ -1.23
BRCA1-216ENST00000484087 CCDC149Q6ZUS6 474 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 RHOT2Q8IXI1 618 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 SLC30A5Q8TAD4 765 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 CXorf38Q8TB03 319 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 ITFG1Q8TB96 612 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 POM121Q96HA1 1249 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 SENP8Q96LD8 212 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 KREMEN1Q96MU8 473 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 RTP3Q9BQQ7 232 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 SELENOOQ9BVL4 669 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 PACSIN1Q9BY11 444 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 PLEKHA5Q9HAU0 1116 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 PIDD1Q9HB75 910 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 CYP4F11Q9HBI6 524 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.34□□□□□ -1.23
BRCA1-216ENST00000484087 PRKAG3Q9UGI9 489 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 LIMD1Q9UGP4 676 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 AGAP1Q9UPQ3 857 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 FAM50BQ9Y247 325 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 SSX2IPQ9Y2D8 614 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 MYH10P35580 1976 aa7.34□□□□□ -1.23
BRCA1-216ENST00000484087 CARNS1A5YM72 827 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 M0QZQ0 153 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 DCXO43602 365 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 TBC1D4O60343 1298 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 CYP3A5P20815 502 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 ABCB4P21439 1286 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 GBP2P32456 591 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-216ENST00000484087 RPL9P32969 192 aaKnown RBP7.33□□□□□ -1.24
BRCA1-216ENST00000484087 MTHFRP42898 656 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 AARSP49588 968 aaKnown RBP eCLIP7.33□□□□□ -1.24
BRCA1-216ENST00000484087 GPR15P49685 360 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 NOP14P78316 857 aaKnown RBP7.33□□□□□ -1.24
BRCA1-216ENST00000484087 GPC5P78333 572 aa7.33□□□□□ -1.24
BRCA1-216ENST00000484087 YWHAHQ04917 246 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms