RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TCEAL4Q96EI5 215 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 RIPOR3Q96MK2 946 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 HAUS4Q9H6D7 363 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 AIPL1Q9NZN9 384 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 PCDHGC3Q9UN70 934 aa18.82■□□□□ 0.6
CPNE1-224ENST00000483359 A0A1W2PRU2 124 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 MFAP3LO75121 409 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 POU2F2P09086 479 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 LCP1P13796 627 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 CHRNB2P17787 502 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 GABRR2P28476 465 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 PLA2G4AP47712 749 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 KCNQ1P51787 676 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 FMO1Q01740 532 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 KLHL30Q0D2K2 578 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 ADIGQ0VDE8 80 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 CYP4A22Q5TCH4 519 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 PTCRAQ6ISU1 281 aaPredicted RBP18.81■□□□□ 0.6
CPNE1-224ENST00000483359 SLC35F5Q8WV83 523 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 LRRC3Q9BY71 257 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 CEP83Q9Y592 693 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 CLUHO75153 1309 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 PAPLNO95428 1278 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 TBX2Q13207 712 aaPredicted RBP18.81■□□□□ 0.6
CPNE1-224ENST00000483359 SMYD5Q6GMV2 418 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 ZNF677Q86XU0 584 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 FMNL3Q8IVF7 1028 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 NUCKS1Q9H1E3 243 aaKnown RBP18.81■□□□□ 0.6
CPNE1-224ENST00000483359 LRRC4Q9HBW1 653 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 WDR6Q9NNW5 1121 aaKnown RBP18.81■□□□□ 0.6
CPNE1-224ENST00000483359 PNPLA8Q9NP80 782 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 ABHD10Q9NUJ1 306 aa18.81■□□□□ 0.6
CPNE1-224ENST00000483359 NOTCH4Q99466 2003 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 IL9P15248 144 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 YWHAQP27348 245 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 MTHFRP42898 656 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 TKTL1P51854 596 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 CYP4F8P98187 520 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 PDCLQ13371 301 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 GAREM2Q75VX8 874 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 WDTC1Q8N5D0 677 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 ITFG1Q8TB96 612 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 SUSD6Q92537 303 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 FBXO32Q969P5 355 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 AGPAT1Q99943 283 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 ATXN3LQ9H3M9 355 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 IL21Q9HBE4 155 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 TJP2Q9UDY2 1190 aa18.8■□□□□ 0.6
CPNE1-224ENST00000483359 MRPS23Q9Y3D9 190 aaKnown RBP18.8■□□□□ 0.6
CPNE1-224ENST00000483359 ZNF638Q14966 1978 aaKnown RBP18.8■□□□□ 0.6
CPNE1-224ENST00000483359 AKR1B15C9JRZ8 316 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-224ENST00000483359 RTN3O95197 1032 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-224ENST00000483359 PLEKP08567 350 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-224ENST00000483359 TAF10Q12962 218 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 STXBP5Q5T5C0 1151 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 NAA35Q5VZE5 725 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 CYP26C1Q6V0L0 522 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 CNGA4Q8IV77 575 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 SIX6OS1Q8N1H7 587 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 TRMT2BQ96GJ1 504 aaKnown RBP18.79■□□□□ 0.6
CPNE1-224ENST00000483359 CEP295NLQ96MC4 621 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 VCANP13611 3396 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 DENND4AQ7Z401 1863 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 TADA3O75528 432 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 ABL1P00519 1130 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 USP17L7P0C7H9 530 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 CEBPBP17676 345 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 FSHRP23945 695 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 KIF11P52732 1056 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 GSE1Q14687 1217 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 MEA1Q16626 185 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 HGSNATQ68CP4 663 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 ZNF571Q7Z3V5 609 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-224ENST00000483359 TMEM150AQ86TG1 271 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 TMEM35BQ8NCS4 154 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 OR8K1Q8NGG5 319 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 SHKBP1Q8TBC3 707 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 CPA5Q8WXQ8 436 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 NDRG1Q92597 394 aaKnown RBP18.79■□□□□ 0.6
CPNE1-224ENST00000483359 MYRFLQ96LU7 910 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 GCNAQ96QF7 691 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 PCDHB18PQ96TA0 734 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 DNAJC7Q99615 494 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 TTLL2Q9BWV7 592 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 ULBP1Q9BZM6 244 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 MIS12Q9H081 205 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 LHX5Q9H2C1 402 aa18.79■□□□□ 0.6
CPNE1-224ENST00000483359 UXTQ9UBK9 157 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-224ENST00000483359 CHORDC1Q9UHD1 332 aaPredicted RBP18.79■□□□□ 0.6
CPNE1-224ENST00000483359 E5RJQ4 531 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 GABBR2O75899 941 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 CDC25BP30305 580 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 PRKCIP41743 596 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 EPHA5P54756 1037 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 TEAD2Q15562 447 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 C2CD6Q53TS8 623 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 RAB41Q5JT25 222 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 PRSS36Q5K4E3 855 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 CLEC4CQ8WTT0 213 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 SYN2Q92777 582 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms