RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 C4orf50Q6ZRC1 276 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 DENND5BQ6ZUT9 1274 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 DPH6Q7L8W6 267 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 PGBD3Q8N328 593 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 DEFB119Q8N690 84 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 SPATA18Q8TC71 538 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 WHAMMQ8TF30 809 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 HMGB4Q8WW32 186 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 ZCCHC14Q8WYQ9 949 aaKnown RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 MYLPFQ96A32 169 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 HPDLQ96IR7 371 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 TMX3Q96JJ7 454 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 SPATA17Q96L03 361 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 SYT15Q9BQS2 421 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 CBWD1Q9BRT8 395 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 MTMR12Q9C0I1 747 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 SLC32A1Q9H598 525 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 POLMQ9NP87 494 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 CRTAC1Q9NQ79 661 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 FSCN3Q9NQT6 498 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 BCCIPQ9P287 314 aaKnown RBP eCLIP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 SEL1LQ9UBV2 794 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 MBD1Q9UIS9 605 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 CDH9Q9ULB4 789 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 R3HCC1Q9Y3T6 440 aaKnown RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 PCDHB13Q9Y5F0 798 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 CPQQ9Y646 472 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 NUP210Q8TEM1 1887 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-206ENST00000483030 FAM208BQ5VWN6 2430 aa7.89□□□□□ -1.15
CSDE1-206ENST00000483030 SCN1AP35498 2009 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 ATXN2Q99700 1313 aaKnown RBP7.88□□□□□ -1.15
CSDE1-206ENST00000483030 A0A0A0MRY4 1105 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 F8VP50 259 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 SLC9A3R1O14745 358 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-206ENST00000483030 ADAM23O75077 832 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 CFIP05156 583 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 TMEM191BP0C7N4 346 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 IDEP14735 1019 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 GAP43P17677 238 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 PFKLP17858 780 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 GARTP22102 1010 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 ITPKAP23677 461 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 GRIA2P42262 883 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 KIR2DL1P43626 348 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-206ENST00000483030 CASP5P51878 434 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 ATXN3P54252 364 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-206ENST00000483030 SIM1P81133 766 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-206ENST00000483030 KDSRQ06136 332 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 RING1Q06587 406 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 TAF10Q12962 218 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 RESTQ13127 1097 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 BYSLQ13895 437 aaKnown RBP7.88□□□□□ -1.15
CSDE1-206ENST00000483030 MAPRE1Q15691 268 aaKnown RBP7.88□□□□□ -1.15
CSDE1-206ENST00000483030 HSF5Q4G112 596 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-206ENST00000483030 EOGTQ5NDL2 527 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 RRAGBQ5VZM2 374 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 LYSMD4Q5XG99 296 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 SLC23A3Q6PIS1 610 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 LRSAM1Q6UWE0 723 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 SV2BQ7L1I2 683 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 LIMS2Q7Z4I7 341 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 C12orf40Q86WS4 652 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 OR5B17Q8NGF7 314 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 MYCBPAPQ8TBZ2 947 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 KBTBD7Q8WVZ9 684 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 DNAJC19Q96DA6 116 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 PCED1BQ96HM7 432 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 SPACA7Q96KW9 195 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 MMS19Q96T76 1030 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 TTLL2Q9BWV7 592 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 GTPBP2Q9BX10 602 aaKnown RBP7.88□□□□□ -1.15
CSDE1-206ENST00000483030 FGFBP2Q9BYJ0 223 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 ARHGEF4Q9NR80 690 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 INTS13Q9NVM9 706 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 CFAP97Q9P2B7 532 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 CCDC39Q9UFE4 941 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 PILRBQ9UKJ0 227 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 KLK13Q9UKR3 277 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 MSRB2Q9Y3D2 182 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 NEUROG3Q9Y4Z2 214 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 ABCA7Q8IZY2 2146 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 IGF2RP11717 2491 aa7.88□□□□□ -1.15
CSDE1-206ENST00000483030 KIF26AQ9ULI4 1882 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 SPAG17Q6Q759 2223 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 PTPRJQ12913 1337 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 TCRBV21S2A2A0A5A6 115 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 TBC1D3BA6NDS4 549 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 TRIM66O15016 1216 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 ATMINO43313 823 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 PRPF6O94906 941 aaKnown RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 ADH1CP00326 375 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 OAS1P00973 400 aaKnown RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 MBL2P11226 248 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 ADH5P11766 374 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 WARSP23381 471 aaKnown RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 RDXP35241 583 aaKnown RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 GNL1P36915 607 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 EIF2DP41214 584 aaKnown RBP7.87□□□□□ -1.15
CSDE1-206ENST00000483030 TNFRSF4P43489 277 aa7.87□□□□□ -1.15
CSDE1-206ENST00000483030 PPP3CCP48454 512 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms