RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ATP8B3O60423 1300 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 PCNTO95613 3336 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 ENTPD3O75355 529 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 ACADSP16219 412 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 NCKAP1LP55160 1127 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 BCAR1P56945 870 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 DSG1Q02413 1049 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 MMEL1Q495T6 779 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 DENND5BQ6ZUT9 1274 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 IGDCC3Q8IVU1 814 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 ST13P4Q8IZP2 240 aaPredicted RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 PPP4R1Q8TF05 950 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 ABTB1Q969K4 478 aaPredicted RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 MFSD14AQ96MC6 490 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 RPAP3Q9H6T3 665 aaPredicted RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 SAR1AQ9NR31 198 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 POLIQ9UNA4 740 aa13.25□□□□□ -0.29
VPS52-218ENST00000482399 APOBEC2Q9Y235 224 aaKnown RBP13.25□□□□□ -0.29
VPS52-218ENST00000482399 TYROBPO43914 113 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 WFS1O76024 890 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 F7P08709 466 aaPredicted RBP13.24□□□□□ -0.29
VPS52-218ENST00000482399 TCN1P20061 433 aaPredicted RBP13.24□□□□□ -0.29
VPS52-218ENST00000482399 CCND2P30279 289 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 GSTT1P30711 240 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 ABCG1P45844 678 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 ACTR2P61160 394 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 DENND1BQ6P3S1 775 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 TTC16Q8NEE8 873 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 ACSS3Q9H6R3 686 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 IL1RAPL1Q9NZN1 696 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 EP400Q96L91 3159 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 TMEM191CA6NGB0 347 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 E5RJQ4 531 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 TCEA3O75764 348 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 TNNC2P02585 160 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 SNRPAP09012 282 aaKnown RBP13.24□□□□□ -0.29
VPS52-218ENST00000482399 C6orf222P0C671 652 aaPredicted RBP13.24□□□□□ -0.29
VPS52-218ENST00000482399 PDGFRAP16234 1089 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 DEUP1Q05D60 604 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
VPS52-218ENST00000482399 C15orf59Q2T9L4 293 aaPredicted RBP13.24□□□□□ -0.29
VPS52-218ENST00000482399 HACE1Q8IYU2 909 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 RNF149Q8NC42 400 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.24□□□□□ -0.29
VPS52-218ENST00000482399 NRG4Q8WWG1 115 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 ALKBH8Q96BT7 664 aaKnown RBP13.24□□□□□ -0.29
VPS52-218ENST00000482399 ANKEF1Q9NU02 776 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 DDX56Q9NY93 547 aaKnown RBP13.24□□□□□ -0.29
VPS52-218ENST00000482399 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.24□□□□□ -0.29
VPS52-218ENST00000482399 PEX10O60683 326 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 DKC1O60832 514 aaKnown RBP eCLIP13.24□□□□□ -0.29
VPS52-218ENST00000482399 CDKN2BP42772 138 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 COG7P83436 770 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 MED21Q13503 144 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 VPS72Q15906 364 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 PLEKHA7Q6IQ23 1121 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 CES3Q6UWW8 571 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 CDHR3Q6ZTQ4 885 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 SPATA24Q86W54 205 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 TTC13Q8NBP0 860 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 RAB3IL1Q8TBN0 382 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 EBF4Q9BQW3 602 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 DNAJC16Q9Y2G8 782 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 STRCP1A6NGW2 1772 aa13.24□□□□□ -0.29
VPS52-218ENST00000482399 SCN7AQ01118 1682 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 TM9SF1O15321 606 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 AHCYL1O43865 530 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 KRT38O76015 456 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 PROCP04070 461 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 MUTP22033 750 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 MMP8P22894 467 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 DPYSL3Q14195 570 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 C12orf56Q8IXR9 622 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 GALNT4Q8N4A0 578 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 CEP120Q8N960 986 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 CCNYQ8ND76 341 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 PGBD4Q96DM1 585 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 APOPT1Q96IL0 206 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 SHANK3Q9BYB0 1731 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 MAN1C1Q9NR34 630 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 ETAA1Q9NY74 926 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 COQ4Q9Y3A0 265 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 RIPK3Q9Y572 518 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 A0A0B4J269 797 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 AIM2O14862 343 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 VNN1O95497 513 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 ANPEPP15144 967 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 OSBPP22059 807 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 IL1R2P27930 398 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 MIPP30301 263 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 ROR2Q01974 943 aaKnown RBP13.23□□□□□ -0.29
VPS52-218ENST00000482399 EFHC2Q5JST6 749 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 SH3PXD2AQ5TCZ1 1133 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 TFAP2BQ92481 460 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 CENPKQ9BS16 269 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 RNF19AQ9NV58 838 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 SLC17A6Q9P2U8 582 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 AK5Q9Y6K8 562 aa13.23□□□□□ -0.29
VPS52-218ENST00000482399 ZNF541Q9H0D2 1346 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms