RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 ANKS3Q6ZW76 656 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 CACNA2D3Q8IZS8 1091 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 ARHGAP24Q8N264 748 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 HIPK3Q9H422 1215 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 PGAP2Q9UHJ9 254 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 AP4E1Q9UPM8 1137 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 TAF1P21675 1872 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 HMBSP08397 361 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 RBP3P10745 1247 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 ETFBP38117 255 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 CCL14Q16627 93 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 ZBED8Q8IZ13 594 aa20.09■□□□□ 0.81
CCM2-214ENST00000481194 SERPINB11Q96P15 392 aa20.08■□□□□ 0.81
CCM2-214ENST00000481194 BRD8Q9H0E9 1235 aa20.08■□□□□ 0.81
CCM2-214ENST00000481194 OSGEPQ9NPF4 335 aa20.08■□□□□ 0.81
CCM2-214ENST00000481194 BRWD3Q6RI45 1802 aa20.08■□□□□ 0.81
CCM2-214ENST00000481194 ARIH2O95376 493 aa20.08■□□□□ 0.81
CCM2-214ENST00000481194 NR1D1P20393 614 aa20.08■□□□□ 0.81
CCM2-214ENST00000481194 PDCLQ13371 301 aa20.08■□□□□ 0.81
CCM2-214ENST00000481194 KCTD16Q68DU8 428 aa20.08■□□□□ 0.81
CCM2-214ENST00000481194 NOVA2Q9UNW9 492 aaKnown RBP20.08■□□□□ 0.81
CCM2-214ENST00000481194 BIRC2Q13490 618 aa20.08■□□□□ 0.8
CCM2-214ENST00000481194 COG1Q8WTW3 980 aa20.08■□□□□ 0.8
CCM2-214ENST00000481194 GTF2IRD1Q9UHL9 959 aa20.08■□□□□ 0.8
CCM2-214ENST00000481194 MYH6P13533 1939 aa20.08■□□□□ 0.8
CCM2-214ENST00000481194 GJA9P57773 515 aa20.08■□□□□ 0.8
CCM2-214ENST00000481194 RAD51CO43502 376 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 AOC2O75106 756 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 CIB2O75838 187 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 ADIGQ0VDE8 80 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 MAPK7Q13164 816 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 E2F5Q15329 346 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 ERMARDQ5T6L9 678 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 CDCA2Q69YH5 1023 aaPredicted RBP20.07■□□□□ 0.8
CCM2-214ENST00000481194 SMYD5Q6GMV2 418 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 SDCCAG8Q86SQ7 713 aaPredicted RBP20.07■□□□□ 0.8
CCM2-214ENST00000481194 HELQQ8TDG4 1101 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 BTBD6Q96KE9 485 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 TFR2Q9UP52 801 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 PCDHA3Q9Y5H8 950 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 DUSP10Q9Y6W6 482 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 VSIG1Q86XK7 387 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 PPIL6Q8IXY8 311 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 SNX27Q96L92 541 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 NXF3Q9H4D5 531 aaKnown RBP20.07■□□□□ 0.8
CCM2-214ENST00000481194 PCDHGC5Q9Y5F6 944 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 OR6C75A6NL08 312 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 EPHB2P29323 1055 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 RASSF2P50749 326 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 CCNI2Q6ZMN8 369 aaPredicted RBP20.07■□□□□ 0.8
CCM2-214ENST00000481194 ANKRD52Q8NB46 1076 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 SENP1Q9P0U3 644 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 ESYT3A0FGR9 886 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 SIGLEC16A6NMB1 481 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 NPR3P17342 541 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 YWHAQP27348 245 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 MRPS25P82663 173 aaKnown RBP20.07■□□□□ 0.8
CCM2-214ENST00000481194 WSCD1Q658N2 575 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 LINC00523Q86TU6 105 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 LHX5Q9H2C1 402 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 NSMCE4AQ9NXX6 385 aa20.07■□□□□ 0.8
CCM2-214ENST00000481194 GOLGA8MH3BSY2 632 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 ACAT1P24752 427 aaKnown RBP20.06■□□□□ 0.8
CCM2-214ENST00000481194 ST8SIA6P61647 398 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 CCNG2Q16589 344 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 LRRC38Q5VT99 294 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 MUC3BQ9H195 1237 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 POPDC2Q9HBU9 364 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 DNAJC17Q9NVM6 304 aaKnown RBP20.06■□□□□ 0.8
CCM2-214ENST00000481194 PADI3Q9ULW8 664 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 HES2Q9Y543 173 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 TIMM13Q9Y5L4 95 aaPredicted RBP20.06■□□□□ 0.8
CCM2-214ENST00000481194 SNAI1O95863 264 aaPredicted RBP20.06■□□□□ 0.8
CCM2-214ENST00000481194 F2P00734 622 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 CCR1P32246 355 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 ACLYP53396 1101 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 TMC7Q7Z402 723 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 B3GALNT2Q8NCR0 500 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 DOCK2Q92608 1830 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 MYH8P13535 1937 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 SLCO1A2P46721 670 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 CCT5P48643 541 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 RASSF3Q86WH2 238 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 DAW1Q8N136 415 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 RAB6BQ9NRW1 208 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 A0A1B0GUA9 196 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 ANXA9O76027 345 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 EOMESO95936 686 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 CYP2C18P33260 490 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 PDZD8Q8NEN9 1154 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 MBL2P11226 248 aaPredicted RBP20.06■□□□□ 0.8
CCM2-214ENST00000481194 TAC1P20366 129 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 PSEN1P49768 467 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 ATG16L1Q676U5 607 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 TRIM51Q9BSJ1 452 aa20.06■□□□□ 0.8
CCM2-214ENST00000481194 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.05■□□□□ 0.8
CCM2-214ENST00000481194 RBAK-RBAKDNI3L0D1 243 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 GMNNO75496 209 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 SLC4A1P02730 911 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 ZNF177Q13360 481 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms