RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 POLR2FP61218 127 aaKnown RBP21.51■■□□□ 1.03
CTSA-206ENST00000480961 PDE4CQ08493 712 aa21.51■■□□□ 1.03
CTSA-206ENST00000480961 TANGO2Q6ICL3 276 aa21.51■■□□□ 1.03
CTSA-206ENST00000480961 MAB21L3Q8N8X9 362 aa21.51■■□□□ 1.03
CTSA-206ENST00000480961 MRPS31Q92665 395 aaKnown RBP21.51■■□□□ 1.03
CTSA-206ENST00000480961 FBXO32Q969P5 355 aa21.51■■□□□ 1.03
CTSA-206ENST00000480961 PLCB1Q9NQ66 1216 aa21.51■■□□□ 1.03
CTSA-206ENST00000480961 HESX1Q9UBX0 185 aa21.51■■□□□ 1.03
CTSA-206ENST00000480961 TRIOO75962 3097 aa21.51■■□□□ 1.03
CTSA-206ENST00000480961 CUL9Q8IWT3 2517 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 RTN3O95197 1032 aaPredicted RBP21.5■■□□□ 1.03
CTSA-206ENST00000480961 CFHP08603 1231 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 PGFP49763 221 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 FANCCQ00597 558 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 CNGA2Q16280 664 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 FILIP1LQ4L180 1135 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 DENND1BQ6P3S1 775 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 LCLAT1Q6UWP7 414 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 PIGZQ86VD9 579 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 SMARCD2Q92925 531 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 ASB16Q96NS5 453 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 CYP2S1Q96SQ9 504 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 PLA2G2FQ9BZM2 168 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 TASP1Q9H6P5 420 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 NLRC4Q9NPP4 1024 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 TRPM5Q9NZQ8 1165 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 GMIPQ9P107 970 aa21.5■■□□□ 1.03
CTSA-206ENST00000480961 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.5■■□□□ 1.03
CTSA-206ENST00000480961 DENND4AQ7Z401 1863 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 C2orf78A6NCI8 922 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 M0QYV0 167 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 THAP12O43422 761 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 FCARP24071 287 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 GNA15P30679 374 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 FAM71AQ8IYT1 594 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 SLC44A3Q8N4M1 653 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 NEK11Q8NG66 645 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 RSPRY1Q96DX4 576 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 ERGIC2Q96RQ1 377 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 SLC22A12Q96S37 553 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 STK33Q9BYT3 514 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 IL37Q9NZH6 218 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 EHD2Q9NZN4 543 aa21.49■■□□□ 1.03
CTSA-206ENST00000480961 NCOR1O75376 2440 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 A0A1B0GTH6 734 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 ZNF840PA6NDX5 716 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 NARSO43776 548 aaKnown RBP21.48■■□□□ 1.03
CTSA-206ENST00000480961 CLCN1P35523 988 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 RGS7P49802 495 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 BCAT1P54687 386 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 SLC8A3P57103 927 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 ZNF445P59923 1031 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 BST2Q10589 180 aaKnown RBP21.48■■□□□ 1.03
CTSA-206ENST00000480961 MTSS1LQ765P7 747 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 SLC47A2Q86VL8 602 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 MON1AQ86VX9 555 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 ARID3BQ8IVW6 561 aaPredicted RBP21.48■■□□□ 1.03
CTSA-206ENST00000480961 ZNF606Q8WXB4 792 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 SECISBP2LQ93073 1101 aaKnown RBP21.48■■□□□ 1.03
CTSA-206ENST00000480961 SLITRK1Q96PX8 696 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 IGSF9Q9P2J2 1179 aa21.48■■□□□ 1.03
CTSA-206ENST00000480961 F8VZ95 297 aa21.47■■□□□ 1.03
CTSA-206ENST00000480961 PIK3R2O00459 728 aa21.47■■□□□ 1.03
CTSA-206ENST00000480961 PRAMEF12O95522 483 aa21.47■■□□□ 1.03
CTSA-206ENST00000480961 KIF11P52732 1056 aa21.47■■□□□ 1.03
CTSA-206ENST00000480961 TDGQ13569 410 aa21.47■■□□□ 1.03
CTSA-206ENST00000480961 NR1I3Q14994 352 aa21.47■■□□□ 1.03
CTSA-206ENST00000480961 PKDCCQ504Y2 493 aa21.47■■□□□ 1.03
CTSA-206ENST00000480961 ARL14EPQ8N8R7 260 aaPredicted RBP21.47■■□□□ 1.03
CTSA-206ENST00000480961 TTC16Q8NEE8 873 aa21.47■■□□□ 1.03
CTSA-206ENST00000480961 NDRG1Q92597 394 aaKnown RBP21.47■■□□□ 1.03
CTSA-206ENST00000480961 ZFP14Q9HCL3 533 aa21.47■■□□□ 1.03
CTSA-206ENST00000480961 NCANO14594 1321 aa21.47■■□□□ 1.03
CTSA-206ENST00000480961 XPO1O14980 1071 aaKnown RBP21.46■■□□□ 1.03
CTSA-206ENST00000480961 DCXO43602 365 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 PTK2Q05397 1052 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 GRM2Q14416 872 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 STILQ15468 1287 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 PMF1Q6P1K2 205 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 PASD1Q8IV76 773 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 CMTM8Q8IZV2 173 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 LRRC3BQ96PB8 259 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 UBXN6Q9BZV1 441 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 FBXO44Q9H4M3 255 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 EPHX3Q9H6B9 360 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 PNPLA8Q9NP80 782 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 COMMD8Q9NX08 183 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 SORCS3Q9UPU3 1222 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 CCL26Q9Y258 94 aa21.46■■□□□ 1.03
CTSA-206ENST00000480961 FAM170AA1A519 330 aa21.45■■□□□ 1.02
CTSA-206ENST00000480961 FAM92AA1XBS5 289 aa21.45■■□□□ 1.02
CTSA-206ENST00000480961 MED7O43513 233 aa21.45■■□□□ 1.02
CTSA-206ENST00000480961 ECI2O75521 394 aa21.45■■□□□ 1.02
CTSA-206ENST00000480961 GABBR2O75899 941 aa21.45■■□□□ 1.02
CTSA-206ENST00000480961 GFPT2O94808 682 aa21.45■■□□□ 1.02
CTSA-206ENST00000480961 USP17L7P0C7H9 530 aa21.45■■□□□ 1.02
CTSA-206ENST00000480961 SETSIPP0DME0 302 aa21.45■■□□□ 1.02
CTSA-206ENST00000480961 LCP1P13796 627 aa21.45■■□□□ 1.02
CTSA-206ENST00000480961 RFX1P22670 979 aa21.45■■□□□ 1.02
CTSA-206ENST00000480961 DDX6P26196 483 aaKnown RBP eCLIP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms