RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 NUGGCQ68CJ6 796 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 RAPGEF5Q92565 580 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 ART4Q93070 314 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 KATNAL1Q9BW62 490 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 EPB41L4BQ9H329 900 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 NME7Q9Y5B8 376 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 MYADML2A6NDP7 307 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 CCT8L1PA6NM43 557 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 LUC7L3O95232 432 aaKnown RBP17.61■□□□□ 0.41
SH3D21-203ENST00000480549 KRT3P12035 628 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 YARSP54577 528 aaKnown RBP17.61■□□□□ 0.41
SH3D21-203ENST00000480549 ZNF844Q08AG5 666 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 GLRA4Q5JXX5 417 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 UBXN11Q5T124 520 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 EMC10Q5UCC4 262 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 RCOR2Q8IZ40 523 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 TTC39CQ8N584 583 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 ARFGAP1Q8N6T3 406 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 ATP8A1Q9Y2Q0 1164 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 C17orf102A2RUQ5 167 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 PI4K2BG5E9Z4 385 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 GHRP10912 638 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 TUBP50607 506 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 FNIP1Q8TF40 1166 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 MRPL45Q9BRJ2 306 aaKnown RBP17.61■□□□□ 0.41
SH3D21-203ENST00000480549 WDR35Q9P2L0 1181 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 PARP2Q9UGN5 583 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 PIN4Q9Y237 131 aaKnown RBP17.61■□□□□ 0.41
SH3D21-203ENST00000480549 PDHA1P08559 390 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 AKAP5P24588 427 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 ZNF268Q14587 947 aaPredicted RBP17.6■□□□□ 0.41
SH3D21-203ENST00000480549 CCNG2Q16589 344 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 LCLAT1Q6UWP7 414 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 MFSD7Q6UXD7 560 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 TAX1BP1Q86VP1 789 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 MCRS1Q96EZ8 462 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 NT5C1AQ9BXI3 368 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 TMBIM4Q9HC24 238 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 METTL5Q9NRN9 209 aaKnown RBP17.6■□□□□ 0.41
SH3D21-203ENST00000480549 RNF19AQ9NV58 838 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 NEU2Q9Y3R4 380 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 KRT1P04264 644 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 AKR1A1P14550 325 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 RIPK1Q13546 671 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 PTK6Q13882 451 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 DNAJC14Q6Y2X3 702 aaPredicted RBP17.6■□□□□ 0.41
SH3D21-203ENST00000480549 LRRC52Q8N7C0 313 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 UBA3Q8TBC4 463 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 KIAA1257Q9ULG3 409 aa17.6■□□□□ 0.41
SH3D21-203ENST00000480549 A8MUI8 341 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 PFKMP08237 780 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 PSMA2P25787 234 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 IVDP26440 423 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 CRYBB1P53674 252 aaPredicted RBP17.59■□□□□ 0.41
SH3D21-203ENST00000480549 KCNJ2P63252 427 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 SLC25A11Q02978 314 aaKnown RBP17.59■□□□□ 0.41
SH3D21-203ENST00000480549 RBM12BQ8IXT5 1001 aaKnown RBP17.59■□□□□ 0.41
SH3D21-203ENST00000480549 C12orf29Q8N999 325 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 BEST2Q8NFU1 509 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 FAM118BQ9BPY3 351 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 MMADHCQ9H3L0 296 aaPredicted RBP17.59■□□□□ 0.41
SH3D21-203ENST00000480549 TSPAN16Q9UKR8 245 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 SNX9Q9Y5X1 595 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 SCN10AQ9Y5Y9 1956 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 KRT10P13645 584 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 PTPN7P35236 360 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 XKR4Q5GH76 650 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 C9orf57Q5W0N0 161 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 SYDE1Q6ZW31 735 aaPredicted RBP17.59■□□□□ 0.41
SH3D21-203ENST00000480549 EMC1Q8N766 993 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 ACSF2Q96CM8 615 aaPredicted RBP17.59■□□□□ 0.41
SH3D21-203ENST00000480549 APOL6Q9BWW8 343 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 SRRM3A6NNA2 597 aaPredicted RBP17.59■□□□□ 0.41
SH3D21-203ENST00000480549 LRCH4O75427 683 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 SPOCD1Q6ZMY3 1216 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 DPH6Q7L8W6 267 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 POLNQ7Z5Q5 900 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 ATL2Q8NHH9 583 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 P3H4Q92791 437 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 ZIC5Q96T25 663 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 RNF39Q9H2S5 420 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 SYNCQ9H7C4 482 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 STK38LQ9Y2H1 464 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 TLL2Q9Y6L7 1015 aa17.59■□□□□ 0.41
SH3D21-203ENST00000480549 DUSP11O75319 330 aaKnown RBP17.58■□□□□ 0.4
SH3D21-203ENST00000480549 PMS2P54278 862 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 DBN1Q16643 649 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 C7orf31Q8N865 590 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 GRK7Q8WTQ7 553 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 NAF1Q96HR8 494 aaKnown RBP17.58■□□□□ 0.4
SH3D21-203ENST00000480549 FAM129AQ9BZQ8 928 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 LRRC4CQ9HCJ2 640 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 DDX56Q9NY93 547 aaKnown RBP17.58■□□□□ 0.4
SH3D21-203ENST00000480549 WHRNQ9P202 907 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 C3orf70A6NLC5 250 aaPredicted RBP17.58■□□□□ 0.4
SH3D21-203ENST00000480549 MYZAPP0CAP1 466 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 COPS2P61201 443 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 NME8Q8N427 588 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 CCDC197Q8NCU1 140 aa17.58■□□□□ 0.4
SH3D21-203ENST00000480549 UBQLN1Q9UMX0 589 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms