RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 GLUD1P00367 558 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 POMCP01189 267 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CNPP09543 421 aaKnown RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 ALADP13716 330 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 ATF2P15336 505 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 TCF3P15923 654 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 PFKFB1P16118 471 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 KCNA5P22460 613 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 AKAP5P24588 427 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 SYKP43405 635 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 OR1G1P47890 313 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 NRIP1P48552 1158 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 DAB2P98082 770 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CYP27A1Q02318 531 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CEBPZQ03701 1054 aaKnown RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 FAM160A1Q05DH4 1040 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 SNW1Q13573 536 aaKnown RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 LRRC14Q15048 493 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 ZRSR1Q15695 479 aaKnown RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 MSMPQ1L6U9 139 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CT47A1Q5JQC4 288 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CES5AQ6NT32 575 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 SYCE2Q6PIF2 218 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CD300LGQ6UXG3 332 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CRELD2Q6UXH1 353 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 KRBA2Q6ZNG9 492 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 ZNF765Q7L2R6 523 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 SFR1Q86XK3 245 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 WDR49Q8IV35 697 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 ZDHHC14Q8IZN3 488 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 GUF1Q8N442 669 aaKnown RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 RNF169Q8NCN4 708 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 VN1R2Q8NFZ6 395 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 ZNF461Q8TAF7 563 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CXorf38Q8TB03 319 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CACTINQ8WUQ7 758 aaKnown RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 BCL7CQ8WUZ0 217 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 SCFD1Q8WVM8 642 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CCDC47Q96A33 483 aaKnown RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 ZMAT2Q96NC0 199 aaKnown RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 KLHL5Q96PQ7 755 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 UHRF1Q96T88 793 aaPredicted RBP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 C1QTNF1Q9BXJ1 281 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 GPR62Q9BZJ7 368 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 HAPLN2Q9GZV7 340 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 DMAC2Q9NW81 257 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 RMND1Q9NWS8 449 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 GDAP2Q9NXN4 497 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CLDND1Q9NY35 253 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.29□□□□□ -1.56
PTCD3-213ENST00000480102 ITGA11Q9UKX5 1188 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CYP8B1Q9UNU6 501 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 INPP5FQ9Y2H2 1132 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 NR2E1Q9Y466 385 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 HES2Q9Y543 173 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 BDP1A6H8Y1 2624 aa5.29□□□□□ -1.56
PTCD3-213ENST00000480102 CLUHO75153 1309 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 SIP14410 1827 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ZNF233A6NK53 670 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 PI4K2BG5E9Z4 385 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 PODXLO00592 558 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 TEX28O15482 410 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 CYP26A1O43174 497 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 KLRC4O43908 158 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ZNF202O95125 648 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 GCNT3O95395 438 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 RECKO95980 971 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 RPN1P04843 607 aaKnown RBP5.28□□□□□ -1.56
PTCD3-213ENST00000480102 NMT1P30419 496 aaKnown RBP5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ATICP31939 592 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 GTF2H1P32780 548 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 HOXD13P35453 343 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 CLCNKBP51801 687 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 EPHA5P54756 1037 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 MLLT6P55198 1093 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-213ENST00000480102 LILRA4P59901 499 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ASIC1P78348 528 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 GPR17Q13304 367 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 PSMD6Q15008 389 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 EDRF1Q3B7T1 1238 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 LONRF3Q496Y0 759 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 SPECC1Q5M775 1068 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ATAT1Q5SQI0 421 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ZNF280DQ6N043 979 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 CCDC149Q6ZUS6 474 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 OTOP3Q7RTS5 596 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 BMP8AQ7Z5Y6 402 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 ZC3H3Q8IXZ2 948 aaKnown RBP5.28□□□□□ -1.56
PTCD3-213ENST00000480102 TCEAL8Q8IYN2 117 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 TMEM86AQ8N2M4 240 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 GPD1LQ8N335 351 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 TTC39CQ8N584 583 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 TOP6BLQ8N6T0 577 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 TRIML1Q8N9V2 468 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 XXYLT1Q8NBI6 393 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 RNF214Q8ND24 703 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 POMGNT1Q8WZA1 660 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 TAF4BQ92750 862 aa5.28□□□□□ -1.56
PTCD3-213ENST00000480102 DHX58Q96C10 678 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms