RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 SDC4P31431 198 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 FNTAP49354 379 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 MNX1P50219 401 aaPredicted RBP15.13■□□□□ 0.01
CLDN18-203ENST00000479660 COPS2P61201 443 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 CDO1Q16878 200 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 CCDC14Q49A88 953 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 SH3PXD2AQ5TCZ1 1133 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 KAZNQ674X7 775 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 COLGALT2Q8IYK4 626 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 ABI1Q8IZP0 508 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 SUSD3Q96L08 255 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 RUNDC3BQ96NL0 473 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 RTP3Q9BQQ7 232 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 TRIM51Q9BSJ1 452 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 CRISPLD2Q9H0B8 497 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 RAB17Q9H0T7 212 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 KRT82Q9NSB4 513 aa15.13■□□□□ 0.01
CLDN18-203ENST00000479660 BHMG1C9JSJ3 638 aaPredicted RBP15.12■□□□□ 0.01
CLDN18-203ENST00000479660 KRT10P13645 584 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 SCNN1AP37088 669 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 OR1G1P47890 313 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 KCNJ1P48048 391 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 CCL23P55773 120 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 MAP3K7CLP57077 242 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 ATP11AP98196 1134 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 FAAP100Q0VG06 881 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 CUL1Q13616 776 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 OVOS1Q6IE37 1185 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 EMBQ6PCB8 327 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 SPOCD1Q6ZMY3 1216 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 SLC26A9Q7LBE3 791 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 DDX42Q86XP3 938 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLDN18-203ENST00000479660 JAMLQ86YT9 394 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 PPP1R12CQ9BZL4 782 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 LRRC4Q9HBW1 653 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 CHST7Q9NS84 486 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 RASAL2Q9UJF2 1139 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 TET1Q8NFU7 2136 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 DPYSL4O14531 572 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 AP1G2O75843 785 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 TJP3O95049 919 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 TRUB2O95900 331 aaKnown RBP15.12■□□□□ 0.01
CLDN18-203ENST00000479660 DESP17661 470 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 PTGIRP43119 386 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 TLE2Q04725 743 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 ADIGQ0VDE8 80 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 SNX1Q13596 522 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 HLTFQ14527 1009 aaKnown RBP eCLIP15.12■□□□□ 0.01
CLDN18-203ENST00000479660 TRIM60Q495X7 471 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 TFDP3Q5H9I0 405 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 FAM35AQ86V20 835 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 THEM5Q8N1Q8 247 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 KCTD13Q8WZ19 329 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 SEC14L1Q92503 715 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 ERP44Q9BS26 406 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 TRIM31Q9BZY9 425 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 HOMER3Q9NSC5 361 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 LRFN2Q9ULH4 789 aa15.12■□□□□ 0.01
CLDN18-203ENST00000479660 SPDYE4A6NLX3 237 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 DAPK3O43293 454 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 TYMPP19971 482 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 CDKN2BP42772 138 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 ADCY2Q08462 1091 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 INTS6LQ5JSJ4 861 aaKnown RBP15.11■□□□□ 0.01
CLDN18-203ENST00000479660 EFHC1Q5JVL4 640 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 FAM171BQ6P995 826 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 FAM43BQ6ZT52 329 aaPredicted RBP15.11■□□□□ 0.01
CLDN18-203ENST00000479660 SND1Q7KZF4 910 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLDN18-203ENST00000479660 ARCQ7LC44 396 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 EIF1ADQ8N9N8 165 aaKnown RBP15.11■□□□□ 0.01
CLDN18-203ENST00000479660 KCTD6Q8NC69 237 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 FAM172AQ8WUF8 416 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 ATG4AQ8WYN0 398 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 ZNF333Q96JL9 665 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 TOX2Q96NM4 488 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 DCLK3Q9C098 648 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 DPH5Q9H2P9 285 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 NGRNQ9NPE2 291 aaKnown RBP15.11■□□□□ 0.01
CLDN18-203ENST00000479660 DNAJB4Q9UDY4 337 aa15.11■□□□□ 0.01
CLDN18-203ENST00000479660 R3HDM2Q9Y2K5 976 aaKnown RBP15.11■□□□□ 0.01
CLDN18-203ENST00000479660 PRG3Q9Y2Y8 225 aaPredicted RBP15.11■□□□□ 0.01
CLDN18-203ENST00000479660 hCG_1818297A0A087WSY0 165 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 PRPSAP2O60256 369 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 KDELR1P24390 212 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 PTPN7P35236 360 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 YWHAHQ04917 246 aaPredicted RBP15.1■□□□□ 0.01
CLDN18-203ENST00000479660 TCTN1Q2MV58 587 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 RAB6CQ53S08 254 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 DUPD1Q68J44 220 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 CMASQ8NFW8 434 aaPredicted RBP15.1■□□□□ 0.01
CLDN18-203ENST00000479660 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.1■□□□□ 0.01
CLDN18-203ENST00000479660 HSPH1Q92598 858 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 MYLPFQ96A32 169 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 SMARCD1Q96GM5 515 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 KCNK16Q96T55 309 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 SMOQ99835 787 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 RAB6CQ9H0N0 254 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 FAM114A2Q9NRY5 505 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 OGFRQ9NZT2 677 aa15.1■□□□□ 0.01
CLDN18-203ENST00000479660 PCDHB8Q9UN66 801 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms