RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 MFSD4BQ5TF39 518 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 RAPH1Q70E73 1250 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 ZDHHC14Q8IZN3 488 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 MARVELD2Q8N4S9 558 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 OLIG1Q8TAK6 271 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 DNAJC19Q96DA6 116 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 BIRC8Q96P09 236 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 TTC1Q99614 292 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 SYT11Q9BT88 431 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 STK33Q9BYT3 514 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 DDX18Q9NVP1 670 aaKnown RBP13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 GRID1Q9ULK0 1009 aa13.74□□□□□ -0.21
CNKSR3-204ENST00000479339 EXOC1LA0A1B0GW35 172 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 CCDC160A6NGH7 325 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 KBTBD13C9JR72 458 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 BOLA2-SMG1P6H3BVE0 249 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 TYROBPO43914 113 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ZBED1O96006 694 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ICAM1P05362 532 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 TFAP2AP05549 437 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ATP5BP06576 529 aaKnown RBP13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 AKR1A1P14550 325 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ITGA8P53708 1063 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 HDAC4P56524 1084 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 SNAP25P60880 206 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ZNF543Q08ER8 600 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 LETM2Q2VYF4 491 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 PLEKHG4Q58EX7 1191 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 KRT79Q5XKE5 535 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 THOC7Q6I9Y2 204 aaKnown RBP13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 GLYCTKQ8IVS8 523 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 SCAIQ8N9R8 606 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 GLIS3Q8NEA6 775 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 JADE3Q92613 823 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 SNX27Q96L92 541 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 PANX3Q96QZ0 392 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 SENP6Q9GZR1 1112 aaPredicted RBP13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 S100A14Q9HCY8 104 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 GPCPD1Q9NPB8 672 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 HOMER2Q9NSB8 354 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ANAPC5Q9UJX4 755 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 PADI4Q9UM07 663 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 POLIQ9UNA4 740 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 FRMPD2Q68DX3 1309 aaPredicted RBP13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 SLC16A3O15427 465 aaKnown RBP13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ABCB4P21439 1286 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 RPA3P35244 121 aaPredicted RBP13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 COG7P83436 770 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 C1orf146Q5VVC0 180 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 CENPUQ71F23 418 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 TREML1Q86YW5 311 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ERI1Q8IV48 349 aaKnown RBP13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ULK2Q8IYT8 1036 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ALLCQ8N6M5 410 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 ARHGEF26Q96DR7 871 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 MTBPQ96DY7 904 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 VPS11Q9H270 941 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 PPM1HQ9ULR3 514 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 PLA2G4CQ9UP65 541 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 NUMBLQ9Y6R0 609 aa13.73□□□□□ -0.21
CNKSR3-204ENST00000479339 A0A0G2JND7 137 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 A0A1W2PPC1 479 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 TM9SF1O15321 606 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 MAGEB3O15480 346 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 DENRO43583 198 aaKnown RBP13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 MTA2O94776 668 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 NR2F2P24468 414 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 IVDP26440 423 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 SLC16A2P36021 539 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 MSLNQ13421 630 aaPredicted RBP13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 KRT81Q14533 505 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 CCDC153Q494R4 210 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 NADK2Q4G0N4 442 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 AADACL2Q6P093 401 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 FAM186BQ8IYM0 893 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 AHI1Q8N157 1196 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 RFWD2Q8NHY2 731 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 KRT35Q92764 455 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 CGREF1Q99674 301 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 C1orf21Q9H246 121 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 ZNF696Q9H7X3 374 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 KIAA1586Q9HCI6 787 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 XPNPEP3Q9NQH7 507 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 DCTN4Q9UJW0 460 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 CCPG1Q9ULG6 757 aa13.72□□□□□ -0.21
CNKSR3-204ENST00000479339 TNFAIP8O95379 198 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 PGM3O95394 542 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 KRT15P19012 456 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 BMP8BP34820 402 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 CNTN2Q02246 1040 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 RELAQ04206 551 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 SLC1A5Q15758 541 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 USP41Q3LFD5 358 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 SFT2D3Q587I9 215 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 GPATCH4Q5T3I0 446 aaKnown RBP13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 LVRNQ6Q4G3 990 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 ICA1LQ8NDH6 482 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 HSPBAP1Q96EW2 488 aa13.71□□□□□ -0.21
CNKSR3-204ENST00000479339 MTMR9Q96QG7 549 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms