RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 KRT72Q14CN4 511 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 ANO6Q4KMQ2 910 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 VPS53Q5VIR6 699 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 ICE2Q659A1 982 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 TAF2Q6P1X5 1199 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 PDSS2Q86YH6 399 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 OR2I1PQ8NGU4 316 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 DUX3Q96PT4 197 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 NODALQ96S42 347 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 C7orf25Q9BPX7 421 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 QRSL1Q9H0R6 528 aaKnown RBP2.07□□□□□ -2.08
CALD1-218ENST00000478075 SMOC2Q9H3U7 446 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 GLOD4Q9HC38 313 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 METTL14Q9HCE5 456 aaKnown RBP2.07□□□□□ -2.08
CALD1-218ENST00000478075 MYO6Q9UM54 1294 aa2.07□□□□□ -2.08
CALD1-218ENST00000478075 ULK1O75385 1050 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 ASMTLO95671 621 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 CHEK2O96017 543 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 FESP07332 822 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 PDHA1P08559 390 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 CSRP3P50461 194 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 COASYQ13057 564 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 L1TD1Q5T7N2 865 aaKnown RBP2.06□□□□□ -2.08
CALD1-218ENST00000478075 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 SUSD1Q6UWL2 747 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 PRSS57Q6UWY2 283 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 C16orf71Q8IYS4 520 aaPredicted RBP2.06□□□□□ -2.08
CALD1-218ENST00000478075 OIT3Q8WWZ8 545 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 CNPPD1Q9BV87 410 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 SIK2Q9H0K1 926 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 FZD3Q9NPG1 666 aa2.06□□□□□ -2.08
CALD1-218ENST00000478075 MAGED2Q9UNF1 606 aaPredicted RBP2.06□□□□□ -2.08
CALD1-218ENST00000478075 CKAP5Q14008 2032 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 PDE8BO95263 885 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 TCF15Q12870 199 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 DALRD3Q5D0E6 543 aaKnown RBP2.05□□□□□ -2.08
CALD1-218ENST00000478075 PRAMEF19Q5SWL8 479 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 SOGA3Q5TF21 947 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 CNNM4Q6P4Q7 775 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 CLRN3Q8NCR9 226 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 IFI44Q8TCB0 444 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 LMBR1Q8WVP7 490 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 TMX3Q96JJ7 454 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 RETREG1Q9H6L5 497 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 RLIMQ9NVW2 624 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 IGSF9Q9P2J2 1179 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 PCDHGA2Q9Y5H1 932 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 RAD54BQ9Y620 910 aa2.05□□□□□ -2.08
CALD1-218ENST00000478075 AKAP10O43572 662 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 USP12O75317 370 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 GCLCP48506 637 aaPredicted RBP2.04□□□□□ -2.08
CALD1-218ENST00000478075 CDC42EP1Q00587 391 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 TARDBPQ13148 414 aaKnown RBP eCLIP2.04□□□□□ -2.08
CALD1-218ENST00000478075 HABP2Q14520 560 aaPredicted RBP2.04□□□□□ -2.08
CALD1-218ENST00000478075 TOR2AQ5JU69 321 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 BCDIN3DQ7Z5W3 292 aaKnown RBP2.04□□□□□ -2.08
CALD1-218ENST00000478075 RSPH3Q86UC2 560 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 RHOT1Q8IXI2 618 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 RFLNBQ8N5W9 214 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 DUX5Q96PT3 197 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 LENG8Q96PV6 779 aaPredicted RBP2.04□□□□□ -2.08
CALD1-218ENST00000478075 TANGO6Q9C0B7 1094 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 GABRQQ9UN88 632 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 DNM3Q9UQ16 869 aa2.04□□□□□ -2.08
CALD1-218ENST00000478075 DOCK7Q96N67 2140 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 GOLGA8AA7E2F4 631 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 TLX3O43711 291 aaPredicted RBP2.03□□□□□ -2.08
CALD1-218ENST00000478075 MT-CO3P00414 261 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 ZNF883P0CG24 379 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 GTF2F1P35269 517 aaKnown RBP eCLIP2.03□□□□□ -2.08
CALD1-218ENST00000478075 TOB1P50616 345 aaPredicted RBP2.03□□□□□ -2.08
CALD1-218ENST00000478075 KCNJ12Q14500 433 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 RAB39AQ14964 217 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 INO80DQ53TQ3 878 aaPredicted RBP2.03□□□□□ -2.08
CALD1-218ENST00000478075 MEX3BQ6ZN04 569 aaKnown RBP2.03□□□□□ -2.08
CALD1-218ENST00000478075 TRILQ7L0X0 811 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 DCUN1D3Q8IWE4 304 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 TGFBRAP1Q8WUH2 860 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 XAGE5Q8WWM1 108 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 NINJ1Q92982 152 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 EPYCQ99645 322 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 TDP1Q9NUW8 608 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 PRO0461Q9UI25 63 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 LIMCH1Q9UPQ0 1083 aa2.03□□□□□ -2.08
CALD1-218ENST00000478075 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 TMEM272A0A1B0GTI8 110 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 A1L4Q6 167 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 BMPR1BO00238 502 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 SGTAO43765 313 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 BPIP17213 487 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 HOXA11P31270 313 aaPredicted RBP2.02□□□□□ -2.09
CALD1-218ENST00000478075 MTNR1BP49286 362 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 SOX8P57073 446 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 ACSM2AQ08AH3 577 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 RNASE12Q5GAN4 147 aaKnown RBP2.02□□□□□ -2.09
CALD1-218ENST00000478075 TMEM65Q6PI78 240 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 VSTM1Q6UX27 236 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 SLC44A5Q8NCS7 719 aa2.02□□□□□ -2.09
CALD1-218ENST00000478075 TARS2Q9BW92 718 aaKnown RBP2.02□□□□□ -2.09
CALD1-218ENST00000478075 GPR35Q9HC97 309 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms