RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 VWA5B1Q5TIE3 1220 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 ENOSF1Q7L5Y1 443 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 SCUBE3Q8IX30 993 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 ADAM32Q8TC27 787 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 TEKT4Q8WW24 435 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 CLMNQ96JQ2 1002 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 MARK4Q96L34 752 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 SYT11Q9BT88 431 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 XPNPEP1Q9NQW7 623 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 CYP39A1Q9NYL5 469 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 DNALI1O14645 258 aaPredicted RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 TMEM63AO94886 807 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 TNNC2P02585 160 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 SUPT20HL2P0C7V6 817 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 KCNA2P16389 499 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 GARTP22102 1010 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 AMPD1P23109 780 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 GSCP56915 257 aaPredicted RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 SUPT20HL1Q3ZLR7 823 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 RABGAP1LQ5R372 815 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 XRRA1Q6P2D8 792 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 PCGF5Q86SE9 256 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 IGDCC3Q8IVU1 814 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 SNX31Q8N9S9 440 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 SMC1BQ8NDV3 1235 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 SHKBP1Q8TBC3 707 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 WDR60Q8WVS4 1066 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 SCG3Q8WXD2 468 aaKnown RBP10.19□□□□□ -0.78
CMC1-209ENST00000477739 SLITRK1Q96PX8 696 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 B3GNT5Q9BYG0 378 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 TRIM4Q9C037 500 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 ST6GALNAC4Q9H4F1 302 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 KCNG1Q9UIX4 513 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 HES2Q9Y543 173 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 SCINQ9Y6U3 715 aa10.19□□□□□ -0.78
CMC1-209ENST00000477739 MYPNQ86TC9 1320 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 FCHO1O14526 889 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 HCRTO43612 131 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 ATP9BO43861 1147 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 OATP04181 439 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 GHRP10912 638 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 IL1R2P27930 398 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 BCAR1P56945 870 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 CCNG2Q16589 344 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 LACTB2Q53H82 288 aaPredicted RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 PLEKHG4Q58EX7 1191 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 TFDP3Q5H9I0 405 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 ZNF667Q5HYK9 610 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 SLFN12LQ6IEE8 588 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 UTP4Q969X6 686 aaKnown RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 TRIM11Q96F44 468 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 COL11A2P13942 1736 aaPredicted RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 LTBP1Q14766 1721 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 FOCADQ5VW36 1801 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 SORBS2O94875 1100 aaKnown RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 NPTXRO95502 500 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 GLRBP48167 497 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 STAT5BP51692 787 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 NME3Q13232 169 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 RASA2Q15283 850 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 RNF135Q8IUD6 432 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 FAM81BQ96LP2 452 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 TSR3Q9UJK0 312 aaKnown RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 PAEPP09466 180 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 RPS12P25398 132 aaKnown RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 ARL1P40616 181 aaPredicted RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 ZNF200P98182 395 aaPredicted RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 ROR1Q01973 937 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 R3HDM1Q15032 1099 aaKnown RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 TMEM63BQ5T3F8 832 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 DENND5BQ6ZUT9 1274 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 GALNT4Q8N4A0 578 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 SPATA6LQ8N4H0 392 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 DNAAF3Q8N9W5 541 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 BBOF1Q8ND07 529 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 OR6B3Q8NGW1 331 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 PIWIL1Q96J94 861 aaKnown RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 MFSD14AQ96MC6 490 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 TXLNGYQ9BZA5 131 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 RNPEPL1Q9HAU8 725 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 KLK14Q9P0G3 267 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 ZFATQ9P243 1243 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 CSADQ9Y600 493 aa10.18□□□□□ -0.78
CMC1-209ENST00000477739 COL2A1P02458 1487 aaPredicted RBP10.18□□□□□ -0.78
CMC1-209ENST00000477739 C19orf81C9J6K1 198 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 E9PBE3 544 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 MAP3K7O43318 606 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 KLHL41O60662 606 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 VNN1O95497 513 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 SLC4A1P02730 911 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 VTNP04004 478 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 ZBTB48P10074 688 aaPredicted RBP10.17□□□□□ -0.78
CMC1-209ENST00000477739 RBL1P28749 1068 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 MIPP30301 263 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 GCNT1Q02742 428 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 KLC1Q07866 573 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 AP1B1Q10567 949 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 CRYMQ14894 314 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 AP1ARQ63HQ0 302 aa10.17□□□□□ -0.78
CMC1-209ENST00000477739 EEF1DP3Q658K8 133 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms