RNA–Protein interactions for RNA: ENST00000476360.1

XRCC5-208, Transcript of X-ray repair cross complementing 5, humanhuman

TSL 2

Gene XRCC5, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC5-208ENST00000476360 OLIG1Q8TAK6 271 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.6□□□□□ -0.871e-6■■■■■ 43.6
XRCC5-208ENST00000476360 RFFLQ8WZ73 363 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 PBKQ96KB5 322 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 LRRC3BQ96PB8 259 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.6□□□□□ -0.87
XRCC5-208ENST00000476360 GPR88Q9GZN0 384 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 CCDC113Q9H0I3 377 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 KIAA1586Q9HCI6 787 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 MED4Q9NPJ6 270 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 AVENQ9NQS1 362 aaPredicted RBP9.6□□□□□ -0.87
XRCC5-208ENST00000476360 SNTG2Q9NY99 539 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 ARHGAP28Q9P2N2 729 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 MTRRQ9UBK8 725 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 PARP2Q9UGN5 583 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 SALL4Q9UJQ4 1053 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 DNAJC12Q9UKB3 198 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 TBX20Q9UMR3 447 aa9.6□□□□□ -0.87
XRCC5-208ENST00000476360 SF3B1O75533 1304 aaKnown RBP eCLIP9.59□□□□□ -0.879e-6■■■■■ 68.9
XRCC5-208ENST00000476360 F5P12259 2224 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 ARHGEF37A1IGU5 675 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 I3L4J1 428 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 TULP1O00294 542 aaPredicted RBP9.59□□□□□ -0.87
XRCC5-208ENST00000476360 PDE2AO00408 941 aaPredicted RBP9.59□□□□□ -0.87
XRCC5-208ENST00000476360 DDX3XO00571 662 aaKnown RBP eCLIP9.59□□□□□ -0.871e-17■■■■□ 20.2
XRCC5-208ENST00000476360 PALMO75781 387 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 SASH3O75995 380 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 ERLIN2O94905 339 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 ABLIM3O94929 683 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 SEC31AO94979 1220 aaKnown RBP9.59□□□□□ -0.87
XRCC5-208ENST00000476360 VNN2O95498 520 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 RHOXF2BP0C7M4 288 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 TRIM49P0CI25 452 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 TRIM49CP0CI26 452 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 CHRNB1P11230 501 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 TKTP29401 623 aaKnown RBP9.59□□□□□ -0.87
XRCC5-208ENST00000476360 NPTX2P47972 431 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 PEX3P56589 373 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 APBA1Q02410 837 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 ADCY1Q08828 1119 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 SPEM2Q0P670 501 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 NNTQ13423 1086 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 FAM187BQ17R55 369 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 PABPC1LQ4VXU2 614 aaKnown RBP9.59□□□□□ -0.87
XRCC5-208ENST00000476360 PPM1LQ5SGD2 360 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 ALKAL1Q6UXT8 129 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 MTSS1LQ765P7 747 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 ENOSF1Q7L5Y1 443 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 CEP57Q86XR8 500 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 RHOT2Q8IXI1 618 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 LRRC57Q8N9N7 239 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 TCP11Q8WWU5 503 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 PKNOX2Q96KN3 472 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 PPP1R10Q96QC0 940 aaKnown RBP9.59□□□□□ -0.87
XRCC5-208ENST00000476360 RHOXF2Q9BQY4 288 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 CBWD1Q9BRT8 395 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 CHRDQ9H2X0 955 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 TMEM8AQ9HCN3 771 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 POLD4Q9HCU8 107 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 KMT5AQ9NQR1 393 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 RXFP3Q9NSD7 469 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 NCDNQ9UBB6 729 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 AJAP1Q9UKB5 411 aaPredicted RBP9.59□□□□□ -0.87
XRCC5-208ENST00000476360 MYH10P35580 1976 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 LAMA5O15230 3695 aa9.59□□□□□ -0.87
XRCC5-208ENST00000476360 CACNA1GO43497 2377 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 PRR5-ARHGAP8B1AHC4 643 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 CCDC188H7C350 402 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 K7ESF4 209 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 SLC30A4O14863 429 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 SLC16A4O15374 487 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 SRGAP2O75044 1071 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 RECQL4O94761 1208 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 VIPR2P41587 438 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 NAMPTP43490 491 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 BRCC3P46736 316 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 AARSP49588 968 aaKnown RBP eCLIP9.58□□□□□ -0.88
XRCC5-208ENST00000476360 CLCNKBP51801 687 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 NAP1L1P55209 391 aaKnown RBP9.58□□□□□ -0.88
XRCC5-208ENST00000476360 ARHGAP8P85298 464 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 SATB1Q01826 763 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 LMNB2Q03252 620 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 ARID5AQ03989 594 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 MRPL58Q14197 206 aaKnown RBP9.58□□□□□ -0.88
XRCC5-208ENST00000476360 GRM2Q14416 872 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 CASP8Q14790 479 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 SNRNP35Q16560 246 aaKnown RBP9.58□□□□□ -0.88
XRCC5-208ENST00000476360 UPP1Q16831 310 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 XKR4Q5GH76 650 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 C1orf220Q5T0J3 134 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 KRT39Q6A163 491 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 EMBQ6PCB8 327 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 VITQ6UXI7 678 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 EXOC8Q8IYI6 725 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 TPCN2Q8NHX9 752 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 ACTRT1Q8TDG2 376 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 COG1Q8WTW3 980 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 TAF4BQ92750 862 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 ELSPBP1Q96BH3 223 aa9.58□□□□□ -0.88
XRCC5-208ENST00000476360 DDX27Q96GQ7 796 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms