RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 XPO1O14980 1071 aaKnown RBP31.22■■■□□ 2.59
HOXB3-208ENST00000476342 CBFA2T2O43439 604 aa31.22■■■□□ 2.59
HOXB3-208ENST00000476342 LAMP2P13473 410 aa31.22■■■□□ 2.59
HOXB3-208ENST00000476342 SSTR3P32745 418 aaPredicted RBP31.22■■■□□ 2.59
HOXB3-208ENST00000476342 CLCN1P35523 988 aa31.22■■■□□ 2.59
HOXB3-208ENST00000476342 JAM2P57087 298 aa31.22■■■□□ 2.59
HOXB3-208ENST00000476342 PDE4CQ08493 712 aa31.22■■■□□ 2.59
HOXB3-208ENST00000476342 SLITRK6Q9H5Y7 841 aa31.22■■■□□ 2.59
HOXB3-208ENST00000476342 ACP6Q9NPH0 428 aa31.22■■■□□ 2.59
HOXB3-208ENST00000476342 ZMYM5Q9UJ78 669 aa31.22■■■□□ 2.59
HOXB3-208ENST00000476342 HHLA1C9JL84 531 aa31.21■■■□□ 2.59
HOXB3-208ENST00000476342 PPP3CCP48454 512 aa31.21■■■□□ 2.59
HOXB3-208ENST00000476342 PTPN21Q16825 1174 aa31.21■■■□□ 2.59
HOXB3-208ENST00000476342 PKDCCQ504Y2 493 aa31.21■■■□□ 2.59
HOXB3-208ENST00000476342 SCAMP5Q8TAC9 235 aa31.21■■■□□ 2.59
HOXB3-208ENST00000476342 UBA3Q8TBC4 463 aa31.21■■■□□ 2.59
HOXB3-208ENST00000476342 MRPS31Q92665 395 aaKnown RBP31.21■■■□□ 2.59
HOXB3-208ENST00000476342 MCRS1Q96EZ8 462 aa31.21■■■□□ 2.59
HOXB3-208ENST00000476342 MYO16Q9Y6X6 1858 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 DDX6P26196 483 aaKnown RBP eCLIP31.2■■■□□ 2.593e-6■■■□□ 19.1
HOXB3-208ENST00000476342 SOX5P35711 763 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 STAT1P42224 750 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 CYP4F8P98187 520 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 TMEM150AQ86TG1 271 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 PIGZQ86VD9 579 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 SLC47A2Q86VL8 602 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 GJD3Q8N144 294 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 PDZD8Q8NEN9 1154 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 OVCA2Q8WZ82 227 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 FBXO32Q969P5 355 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 IL37Q9NZH6 218 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 TRPM5Q9NZQ8 1165 aa31.2■■■□□ 2.59
HOXB3-208ENST00000476342 PLA2G4AP47712 749 aa31.19■■■□□ 2.58
HOXB3-208ENST00000476342 PDE6CP51160 858 aa31.19■■■□□ 2.58
HOXB3-208ENST00000476342 TAF10Q12962 218 aa31.19■■■□□ 2.58
HOXB3-208ENST00000476342 GPRIN1Q7Z2K8 1008 aa31.19■■■□□ 2.58
HOXB3-208ENST00000476342 NECAB3Q96P71 396 aaPredicted RBP31.19■■■□□ 2.58
HOXB3-208ENST00000476342 XPO4Q9C0E2 1151 aaKnown RBP31.19■■■□□ 2.58
HOXB3-208ENST00000476342 A0A0C4DFX4 3053 aa31.19■■■□□ 2.58
HOXB3-208ENST00000476342 NRG2O14511 850 aaPredicted RBP31.18■■■□□ 2.58
HOXB3-208ENST00000476342 TADA3O75528 432 aa31.18■■■□□ 2.58
HOXB3-208ENST00000476342 KIF11P52732 1056 aa31.18■■■□□ 2.58
HOXB3-208ENST00000476342 GPR158Q5T848 1215 aa31.18■■■□□ 2.58
HOXB3-208ENST00000476342 SECISBP2LQ93073 1101 aaKnown RBP31.18■■■□□ 2.58
HOXB3-208ENST00000476342 FAM92AA1XBS5 289 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 SOBPA7XYQ1 873 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 GFPT2O94808 682 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 KRT9P35527 623 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 PBX1P40424 430 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 FMNL3Q8IVF7 1028 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 NUP58Q9BVL2 599 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 RBSNQ9H1K0 784 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 TASP1Q9H6P5 420 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 PCDHGC3Q9UN70 934 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 ANAPC1Q9H1A4 1944 aa31.17■■■□□ 2.58
HOXB3-208ENST00000476342 CYP11B1P15538 503 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 PLCB2Q00722 1185 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 STXBP5Q5T5C0 1151 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 MTSS1LQ765P7 747 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 SLC35F5Q8WV83 523 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 IQCDQ96DY2 449 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 LRRC4Q9HBW1 653 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 LIMD1Q9UGP4 676 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 MYO6Q9UM54 1294 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 NCANO14594 1321 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 NCOR1O75376 2440 aa31.16■■■□□ 2.58
HOXB3-208ENST00000476342 TULP2O00295 520 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 FIGNQ5HY92 759 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 RAB41Q5JT25 222 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 GAS2L3Q86XJ1 694 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 KCTD13Q8WZ19 329 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 EDEM3Q9BZQ6 932 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 SCML2Q9UQR0 700 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 CEP83Q9Y592 693 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 GPD2P43304 727 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 ZSCAN18Q8TBC5 510 aaPredicted RBP31.15■■■□□ 2.58
HOXB3-208ENST00000476342 NXPE3Q969Y0 559 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 HSFY1Q96LI6 401 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 PDCL3Q9H2J4 239 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 TLR8Q9NR97 1041 aaKnown RBP31.15■■■□□ 2.58
HOXB3-208ENST00000476342 IGSF9Q9P2J2 1179 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 USP3Q9Y6I4 520 aa31.15■■■□□ 2.58
HOXB3-208ENST00000476342 NUP210Q8TEM1 1887 aaPredicted RBP31.15■■■□□ 2.58
HOXB3-208ENST00000476342 ZNF840PA6NDX5 716 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 CCDC172P0C7W6 258 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 TKTL1P51854 596 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 TXNDC8Q6A555 127 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 DENND1BQ6P3S1 775 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 MON1AQ86VX9 555 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 ZNF677Q86XU0 584 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 SIX6OS1Q8N1H7 587 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 MAB21L3Q8N8X9 362 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 EPS8L1Q8TE68 723 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 SMARCD2Q92925 531 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 ZSWIM3Q96MP5 696 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 ASB16Q96NS5 453 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 TTYH3Q9C0H2 523 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 GMIPQ9P107 970 aa31.14■■■□□ 2.58
HOXB3-208ENST00000476342 ABL1P00519 1130 aa31.13■■■□□ 2.57
HOXB3-208ENST00000476342 PFKLP17858 780 aa31.13■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms