RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 VSTM1Q6UX27 236 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 FAM183BPQ6ZVS7 135 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 CATSPER4Q7RTX7 472 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 RFX6Q8HWS3 928 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 TTC13Q8NBP0 860 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 MGARPQ8TDB4 240 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 PEBP4Q96S96 227 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 MRPL45Q9BRJ2 306 aaKnown RBP16.73■□□□□ 0.27
VARS2-207ENST00000476162 CALN1Q9BXU9 219 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 GCOM2Q9BZD3 368 aaPredicted RBP16.73■□□□□ 0.27
VARS2-207ENST00000476162 RAB6CQ9H0N0 254 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 CCDC134Q9H6E4 229 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 RNF19AQ9NV58 838 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 CITO14578 2027 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 CDH16O75309 829 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 GPR32O75388 356 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 GRAP2O75791 330 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 SNUPNO95149 360 aaKnown RBP16.73■□□□□ 0.27
VARS2-207ENST00000476162 RGS7P49802 495 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 FAM110CQ1W6H9 321 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 GOLGA7BQ2TAP0 167 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 ACCSLQ4AC99 568 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 ANKRD20A8PQ5CZ79 823 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 PPP1R26Q5T8A7 1209 aaPredicted RBP16.73■□□□□ 0.27
VARS2-207ENST00000476162 LRRC34Q8IZ02 419 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 TTC39CQ8N584 583 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 RXFP2Q8WXD0 754 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 PARK7Q99497 189 aaKnown RBP16.73■□□□□ 0.27
VARS2-207ENST00000476162 OSMRQ99650 979 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 PLEKHA5Q9HAU0 1116 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 KCNK9Q9NPC2 374 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 TUBGCP4Q9UGJ1 667 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 LGALS13Q9UHV8 139 aa16.73■□□□□ 0.27
VARS2-207ENST00000476162 RRN3P2A6NIE6 340 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 C2CD4BA6NLJ0 364 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 ABHD2P08910 425 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 PDGFRAP16234 1089 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 GPD1P21695 349 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 PCK1P35558 622 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 C15orf59Q2T9L4 293 aaPredicted RBP16.72■□□□□ 0.27
VARS2-207ENST00000476162 GLRA4Q5JXX5 417 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 SLC27A1Q6PCB7 646 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 ACOT1Q86TX2 421 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 C18orf25Q96B23 403 aaPredicted RBP16.72■□□□□ 0.27
VARS2-207ENST00000476162 CFAP57Q96MR6 1250 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 CNPY3Q9BT09 278 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 FAM124BQ9H5Z6 455 aaPredicted RBP16.72■□□□□ 0.27
VARS2-207ENST00000476162 GOLGA8MH3BSY2 632 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 SMIM10L2AP0DMW4 78 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 SMIM10L2BP0DMW5 78 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 BRAFP15056 766 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 MMRN1Q13201 1228 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 CDO1Q16878 200 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 CCDC142Q17RM4 750 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 PMF1Q6P1K2 205 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 ZBED8Q8IZ13 594 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 RSAD2Q8WXG1 361 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 PRCCQ92733 491 aaPredicted RBP16.72■□□□□ 0.27
VARS2-207ENST00000476162 SNX27Q96L92 541 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 FRMD8P1Q9BZ68 369 aaPredicted RBP16.72■□□□□ 0.27
VARS2-207ENST00000476162 EBF2Q9HAK2 575 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 GBA2Q9HCG7 927 aaPredicted RBP16.72■□□□□ 0.27
VARS2-207ENST00000476162 EURLQ9NYK6 297 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 SHOC2Q9UQ13 582 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 NME7Q9Y5B8 376 aa16.72■□□□□ 0.27
VARS2-207ENST00000476162 SCN4AP35499 1836 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 APOC4-APOC2K7ER74 178 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 AP1G2O75843 785 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 APOC2P02655 101 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 VIMP08670 466 aaKnown RBP16.71■□□□□ 0.27
VARS2-207ENST00000476162 CTCFP49711 727 aaPredicted RBP16.71■□□□□ 0.27
VARS2-207ENST00000476162 SF3A3Q12874 501 aaKnown RBP eCLIP16.71■□□□□ 0.27
VARS2-207ENST00000476162 MPP2Q14168 576 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 RBBP5Q15291 538 aaKnown RBP16.71■□□□□ 0.27
VARS2-207ENST00000476162 ZBTB6Q15916 424 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 LACTB2Q53H82 288 aaPredicted RBP16.71■□□□□ 0.27
VARS2-207ENST00000476162 ZC3H12AQ5D1E8 599 aaKnown RBP16.71■□□□□ 0.27
VARS2-207ENST00000476162 SPRYD7Q5W111 196 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 CAPN12Q6ZSI9 719 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 CYP4V2Q6ZWL3 525 aaPredicted RBP16.71■□□□□ 0.27
VARS2-207ENST00000476162 TAX1BP1Q86VP1 789 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 TTC30AQ86WT1 665 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 UNC45BQ8IWX7 931 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 SRRM1Q8IYB3 904 aaKnown RBP16.71■□□□□ 0.27
VARS2-207ENST00000476162 ANKRD42Q8N9B4 389 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 DYDC1Q8WWB3 177 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 TTC25Q96NG3 672 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 MLXIPLQ9NP71 852 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.71■□□□□ 0.27
VARS2-207ENST00000476162 FAM49BQ9NUQ9 324 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 DERAQ9Y315 318 aa16.71■□□□□ 0.27
VARS2-207ENST00000476162 FARP1Q9Y4F1 1045 aaPredicted RBP16.71■□□□□ 0.27
VARS2-207ENST00000476162 TRIP11Q15643 1979 aa16.71■□□□□ 0.26
VARS2-207ENST00000476162 SCN1AP35498 2009 aa16.71■□□□□ 0.26
VARS2-207ENST00000476162 EXOC1LA0A1B0GW35 172 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 A6NJR5 290 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 ALOX15BO15296 676 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 RPL22P35268 128 aaKnown RBP16.7■□□□□ 0.26
VARS2-207ENST00000476162 SCTRP47872 440 aa16.7■□□□□ 0.26
VARS2-207ENST00000476162 YARSP54577 528 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms