RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 PPM1KQ8N3J5 372 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 DEFB123Q8N688 67 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.21□□□□□ -1.26
UBR4-212ENST00000475973 GIMAP7Q8NHV1 300 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 FEZF2Q8TBJ5 459 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 FNIP1Q8TF40 1166 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 NSMCE1Q8WV22 266 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 N4BP2L2Q92802 583 aaPredicted RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 KLHL29Q96CT2 875 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 AGBL1Q96MI9 1066 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 CFAP57Q96MR6 1250 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 TGS1Q96RS0 853 aaKnown RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 CCDC77Q9BR77 488 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 WDR83Q9BRX9 315 aaKnown RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 ZNF518BQ9C0D4 1074 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 VPS11Q9H270 941 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 RNPEPL1Q9HAU8 725 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 APOBEC3GQ9HC16 384 aaKnown RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 PCDH9Q9HC56 1237 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 GPRC5CQ9NQ84 441 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 TOPORSQ9NS56 1045 aaPredicted RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 TXLNGQ9NUQ3 528 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 CHORDC1Q9UHD1 332 aaPredicted RBP7.21□□□□□ -1.26
UBR4-212ENST00000475973 ZMIZ1Q9ULJ6 1067 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 POLIQ9UNA4 740 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.21□□□□□ -1.26
UBR4-212ENST00000475973 L3MBTL1Q9Y468 752 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 SCINQ9Y6U3 715 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 CLUHO75153 1309 aa7.21□□□□□ -1.26
UBR4-212ENST00000475973 ARID2Q68CP9 1835 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 hCG_1818297A0A087WSY0 165 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 DENND3A2RUS2 1198 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 KLF11O14901 512 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 TLR3O15455 904 aaKnown RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 DKC1O60832 514 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBR4-212ENST00000475973 DGAT1O75907 488 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 CABYRO75952 493 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 RGS20O76081 388 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 ACSL3O95573 720 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 CLTAP09496 248 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 KCNA2P16389 499 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 ARL2P36404 184 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 MAGEA6P43360 314 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 IFNAR2P48551 515 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 VCPP55072 806 aaKnown RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 WNT7BP56706 349 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 GJA9P57773 515 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 GPX6P59796 221 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 IL9RQ01113 521 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 TNFAIP2Q03169 654 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 PTK7Q13308 1070 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 CUL2Q13617 745 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 SPARCL1Q14515 664 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 LRRC14Q15048 493 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 KCNA10Q16322 511 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 SGSM1Q2NKQ1 1148 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 C11orf91Q3C1V1 193 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 PLEKHG4Q58EX7 1191 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 FAM133BQ5BKY9 247 aaKnown RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 ZNF697Q5TEC3 545 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 TMEM164Q5U3C3 297 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 TDRD10Q5VZ19 366 aaKnown RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 IZUMO3Q5VZ72 239 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 PLA2G4FQ68DD2 849 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 MIS18BP1Q6P0N0 1132 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 TRAF7Q6Q0C0 670 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 ABHD15Q6UXT9 468 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 ANKRD33Q7Z3H0 272 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 TLK2Q86UE8 772 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 BPHLQ86WA6 291 aaPredicted RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 ERICH1Q86X53 443 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 TEX9Q8N6V9 391 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 NAT8LQ8N9F0 302 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 GLIS1Q8NBF1 620 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 FAM13CQ8NE31 585 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 MCPH1Q8NEM0 835 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 TCP11Q8WWU5 503 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 ATG4AQ8WYN0 398 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 PRCCQ92733 491 aaPredicted RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 BADQ92934 168 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 ALKBH8Q96BT7 664 aaKnown RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 FAM136AQ96C01 138 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 PTCD3Q96EY7 689 aaKnown RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 IFT43Q96FT9 208 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 RBM41Q96IZ5 413 aaKnown RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 TOX2Q96NM4 488 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 SLITRK1Q96PX8 696 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 TAAR1Q96RJ0 339 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 RBM15Q96T37 977 aaKnown RBP eCLIP7.2□□□□□ -1.26
UBR4-212ENST00000475973 HAPLN2Q9GZV7 340 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 AP5M1Q9H0R1 490 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 UPF3AQ9H1J1 476 aaKnown RBP7.2□□□□□ -1.26
UBR4-212ENST00000475973 MYLK2Q9H1R3 596 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 VTA1Q9NP79 307 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 PNPLA8Q9NP80 782 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 PXMP2Q9NR77 195 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 TMEM39AQ9NV64 488 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 MKS1Q9NXB0 559 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 CYP39A1Q9NYL5 469 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms