RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 ERVPABLB-1P60509 514 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 OSTNP61366 133 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 ATP2C1P98194 919 aaPredicted RBP5.21□□□□□ -1.58
USP4-209ENST00000475873 RESTQ13127 1097 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 NR1H3Q13133 447 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 PRPF4BQ13523 1007 aaKnown RBP5.21□□□□□ -1.58
USP4-209ENST00000475873 MYBPC2Q14324 1141 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 PFKFB3Q16875 520 aaPredicted RBP5.21□□□□□ -1.58
USP4-209ENST00000475873 CCDC142Q17RM4 750 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 SLC39A12Q504Y0 691 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 ANKRD45Q5TZF3 282 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 APOA5Q6Q788 366 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 PADI6Q6TGC4 694 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 KIAA1324Q6UXG2 1013 aaKnown RBP5.21□□□□□ -1.58
USP4-209ENST00000475873 CCDC81Q6ZN84 652 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 MAEAQ7L5Y9 396 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 KANSL1Q7Z3B3 1105 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 FILIP1Q7Z7B0 1213 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 EXOC8Q8IYI6 725 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 ZNF713Q8N859 430 aaPredicted RBP5.21□□□□□ -1.58
USP4-209ENST00000475873 CADM4Q8NFZ8 388 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 TBCKQ8TEA7 893 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 SAP25Q8TEE9 199 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 MRPS31Q92665 395 aaKnown RBP5.21□□□□□ -1.58
USP4-209ENST00000475873 GABRG3Q99928 467 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 GLT8D2Q9H1C3 349 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 CDT1Q9H211 546 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 C6orf106Q9H6K1 298 aaPredicted RBP5.21□□□□□ -1.58
USP4-209ENST00000475873 TMEM206Q9H813 350 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 TRPC7Q9HCX4 862 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 PTPRHQ9HD43 1115 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 TM9SF3Q9HD45 589 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 KCNMB3Q9NPA1 279 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 DIAPH3Q9NSV4 1193 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 TMLHEQ9NVH6 421 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 CNTN3Q9P232 1028 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 HSFX1Q9UBD0 423 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 ZMYM5Q9UJ78 669 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 ARHGAP26Q9UNA1 814 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 U3KPZ7 1027 aaPredicted RBP5.21□□□□□ -1.58
USP4-209ENST00000475873 PLXNA2O75051 1894 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 STK36Q9NRP7 1315 aa5.21□□□□□ -1.58
USP4-209ENST00000475873 CKAP5Q14008 2032 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 MYMKA6NI61 221 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 PRRT4C9JH25 899 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 LEFTY2O00292 366 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 USO1O60763 962 aaKnown RBP5.2□□□□□ -1.58
USP4-209ENST00000475873 TULP3O75386 442 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 SLITRK3O94933 977 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 MT-CO3P00414 261 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 IGLV3-19P01714 112 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 WNT1P04628 370 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 CKMP06732 381 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 USP17L7P0C7H9 530 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 LIG1P18858 919 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 ATP2B1P20020 1258 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 UQCRFS1P47985 274 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 GRIA4P48058 902 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 LSSP48449 732 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 RARRES1P49788 294 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 TPMTP51580 245 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 SPAG1Q07617 926 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 VEPH1Q14D04 833 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 SAFBQ15424 915 aaKnown RBP eCLIP5.2□□□□□ -1.58
USP4-209ENST00000475873 SLC10A6Q3KNW5 377 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 DCAF4L1Q3SXM0 396 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 FUT11Q495W5 492 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 LY6G5CQ5SRR4 150 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 C10orf76Q5T2E6 689 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 SFMBT2Q5VUG0 894 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 CDCP2Q5VXM1 449 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 OVOS1Q6IE37 1185 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 EID2Q8N6I1 236 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 NAT16Q8N8M0 369 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 TERB1Q8NA31 727 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 HTR3CQ8WXA8 447 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 NANOS1Q8WY41 292 aaKnown RBP5.2□□□□□ -1.58
USP4-209ENST00000475873 HAS1Q92839 578 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 P2RY11Q96G91 374 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 FAM20AQ96MK3 541 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 FUCA2Q9BTY2 467 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 ZCWPW1Q9H0M4 648 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 CAAP1Q9H8G2 361 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 POLR1BQ9H9Y6 1135 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 POLD4Q9HCU8 107 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 ITM2CQ9NQX7 267 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 SLC38A7Q9NVC3 462 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 MAGED2Q9UNF1 606 aaPredicted RBP5.2□□□□□ -1.58
USP4-209ENST00000475873 SLC12A7Q9Y666 1083 aa5.2□□□□□ -1.58
USP4-209ENST00000475873 NIPBLQ6KC79 2804 aaeCLIP5.2□□□□□ -1.58
USP4-209ENST00000475873 TRAV19A0A0A6YYK7 116 aa5.19□□□□□ -1.58
USP4-209ENST00000475873 TBC1D3BA6NDS4 549 aa5.19□□□□□ -1.58
USP4-209ENST00000475873 CDRT15L2A8MXV6 281 aa5.19□□□□□ -1.58
USP4-209ENST00000475873 M0R2N6 131 aa5.19□□□□□ -1.58
USP4-209ENST00000475873 NOBOXO60393 691 aa5.19□□□□□ -1.58
USP4-209ENST00000475873 USP12O75317 370 aa5.19□□□□□ -1.58
USP4-209ENST00000475873 DGAT1O75907 488 aa5.19□□□□□ -1.58
USP4-209ENST00000475873 NOL4O94818 638 aa5.19□□□□□ -1.58
USP4-209ENST00000475873 ADH5P11766 374 aa5.19□□□□□ -1.58
USP4-209ENST00000475873 CDK4P11802 303 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms