RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 PRDM12Q9H4Q4 367 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 ABCB6Q9NP58 842 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 CRTAC1Q9NQ79 661 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 KRT82Q9NSB4 513 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 CHORDC1Q9UHD1 332 aaPredicted RBP12.87□□□□□ -0.35
MRPL55-227ENST00000475832 CYTH4Q9UIA0 394 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 MSRAQ9UJ68 235 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 MICAL3Q7RTP6 2002 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 PTPRSQ13332 1948 aa12.87□□□□□ -0.35
MRPL55-227ENST00000475832 MYBPHLA2RUH7 354 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 FANCGO15287 622 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 B4GALT3O60512 393 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 RNF8O76064 485 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 GJB5O95377 273 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 BMP1P13497 986 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 FGFR3P22607 806 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 IGFBP6P24592 240 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-227ENST00000475832 PSMA2P25787 234 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 CTNNA2P26232 953 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 MAP3K7CLP57077 242 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 SLC6A3Q01959 620 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 HADHQ16836 314 aaKnown RBP12.86□□□□□ -0.35
MRPL55-227ENST00000475832 USP41Q3LFD5 358 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 SEL1L2Q5TEA6 688 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 KIAA1841Q6NSI8 718 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 CCDC70Q6NSX1 233 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 PMF1Q6P1K2 205 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 RHOT1Q8IXI2 618 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 MYRIPQ8NFW9 859 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 FNIP1Q8TF40 1166 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 ZNF689Q96CS4 500 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-227ENST00000475832 PCED1BQ96HM7 432 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 FUBP3Q96I24 572 aaKnown RBP eCLIP12.86□□□□□ -0.35
MRPL55-227ENST00000475832 CAPZA3Q96KX2 299 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 LPIN3Q9BQK8 851 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 TTPALQ9BTX7 342 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 TRIM62Q9BVG3 475 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 CARD6Q9BX69 1037 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 ZCWPW1Q9H0M4 648 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 DMAP1Q9NPF5 467 aaPredicted RBP12.86□□□□□ -0.35
MRPL55-227ENST00000475832 METTL5Q9NRN9 209 aaKnown RBP12.86□□□□□ -0.35
MRPL55-227ENST00000475832 ASNSD1Q9NWL6 643 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 MARCH5Q9NX47 278 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 SCN1AP35498 2009 aa12.86□□□□□ -0.35
MRPL55-227ENST00000475832 TRIP11Q15643 1979 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 GBF1Q92538 1859 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 F8W810 466 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 CLDN5O00501 218 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 PSTPIP1O43586 416 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 CEP104O60308 925 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 LCP1P13796 627 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 MYOGP15173 224 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 GPD1P21695 349 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 RPL34P49207 117 aaKnown RBP12.85□□□□□ -0.35
MRPL55-227ENST00000475832 RWDD2BP57060 319 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 HTRA4P83105 476 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-227ENST00000475832 PPP1R15BQ5SWA1 713 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 KCNT2Q6UVM3 1135 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 CLEC20AQ6ZU45 233 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 FAM183BPQ6ZVS7 135 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 PIGZQ86VD9 579 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 C2orf15Q8WU43 125 aaKnown RBP12.85□□□□□ -0.35
MRPL55-227ENST00000475832 BTBD6Q96KE9 485 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 PSMB7Q99436 277 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 RTP3Q9BQQ7 232 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 CARD9Q9H257 536 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 GOLPH3Q9H4A6 298 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 CWH43Q9H720 699 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 PNPLA8Q9NP80 782 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 SPG21Q9NZD8 308 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 PACSIN2Q9UNF0 486 aaPredicted RBP12.85□□□□□ -0.35
MRPL55-227ENST00000475832 USTQ9Y2C2 406 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 PCDHB5Q9Y5E4 795 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 PCDHB12Q9Y5F1 795 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 PCDHA3Q9Y5H8 950 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 MYO9BQ13459 2157 aa12.85□□□□□ -0.35
MRPL55-227ENST00000475832 TCF20Q9UGU0 1960 aaKnown RBP12.85□□□□□ -0.35
MRPL55-227ENST00000475832 TDRD15B5MCY1 1934 aaKnown RBP12.84□□□□□ -0.35
MRPL55-227ENST00000475832 TCRBV5S1A1TA0A578 114 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 EFCAB8A8MWE9 144 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 NT5C1B-RDH14C9J2C7 533 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 TRIM66O15016 1216 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 GPR37L1O60883 481 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 SRGAP2O75044 1071 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 GLI1P08151 1106 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 CPB1P15086 417 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 SDC4P31431 198 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 CXCR5P32302 372 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 CTNNA1P35221 906 aaKnown RBP12.84□□□□□ -0.35
MRPL55-227ENST00000475832 RFC1P35251 1148 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-227ENST00000475832 RNASE9P60153 205 aaKnown RBP12.84□□□□□ -0.35
MRPL55-227ENST00000475832 KRT17Q04695 432 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 PTPROQ16827 1216 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 SLC39A12Q504Y0 691 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 ZFYVE27Q5T4F4 411 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 KIAA0319Q5VV43 1072 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 LLGL2Q6P1M3 1020 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 CC2D1AQ6P1N0 951 aaPredicted RBP12.84□□□□□ -0.35
MRPL55-227ENST00000475832 VSTM1Q6UX27 236 aa12.84□□□□□ -0.35
MRPL55-227ENST00000475832 ARCQ7LC44 396 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms