RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 NME7Q9Y5B8 376 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 CPQQ9Y646 472 aa13.24□□□□□ -0.29
CCDC57-208ENST00000475635 ASPMQ8IZT6 3477 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 SCAMP3O14828 347 aaKnown RBP13.23□□□□□ -0.29
CCDC57-208ENST00000475635 KHNYNO15037 678 aaKnown RBP13.23□□□□□ -0.29
CCDC57-208ENST00000475635 OAS1P00973 400 aaKnown RBP13.23□□□□□ -0.29
CCDC57-208ENST00000475635 CST3P01034 146 aaPredicted RBP13.23□□□□□ -0.29
CCDC57-208ENST00000475635 TNNI1P19237 187 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 BCKDHBP21953 392 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 NOVA1P51513 510 aaKnown RBP13.23□□□□□ -0.29
CCDC57-208ENST00000475635 CACNA2D1P54289 1103 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 IFRD2Q12894 506 aaPredicted RBP13.23□□□□□ -0.29
CCDC57-208ENST00000475635 TAF10Q12962 218 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 DHCR24Q15392 516 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 CRY1Q16526 586 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 SNRNP35Q16560 246 aaKnown RBP13.23□□□□□ -0.29
CCDC57-208ENST00000475635 DAB2IPQ5VWQ8 1189 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 ADGRG2Q8IZP9 1017 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 KIAA1958Q8N8K9 716 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 C8orf48Q96LL4 319 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 LRRC27Q9C0I9 530 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 DPEP3Q9H4B8 488 aa13.23□□□□□ -0.29
CCDC57-208ENST00000475635 WDFY3Q8IZQ1 3526 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 SLC9A3R1O14745 358 aaPredicted RBP13.22□□□□□ -0.29
CCDC57-208ENST00000475635 GIPC1O14908 333 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 EIF3DO15371 548 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC57-208ENST00000475635 TGFB1I1O43294 461 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 TACC1O75410 805 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 KAT7O95251 611 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 HNRNPLP14866 589 aaKnown RBP eCLIP13.22□□□□□ -0.29
CCDC57-208ENST00000475635 PTPN1P18031 435 aaKnown RBP13.22□□□□□ -0.29
CCDC57-208ENST00000475635 SLC6A11P48066 632 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 DHPSP49366 369 aaPredicted RBP13.22□□□□□ -0.29
CCDC57-208ENST00000475635 TNNC1P63316 161 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 MRPS21P82921 87 aaKnown RBP13.22□□□□□ -0.29
CCDC57-208ENST00000475635 WDR72Q3MJ13 1102 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 TDRD10Q5VZ19 366 aaKnown RBP13.22□□□□□ -0.29
CCDC57-208ENST00000475635 TMEM92Q6UXU6 159 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 EPM2AIP1Q7L775 607 aaPredicted RBP13.22□□□□□ -0.29
CCDC57-208ENST00000475635 CYP2U1Q7Z449 544 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 C12orf40Q86WS4 652 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 SFTPA1Q8IWL2 248 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 ALLCQ8N6M5 410 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 TXNDC5Q8NBS9 432 aaKnown RBP13.22□□□□□ -0.29
CCDC57-208ENST00000475635 ZNF507Q8TCN5 953 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 CCDC127Q96BQ5 260 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 SLITRK1Q96PX8 696 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 FNBP1Q96RU3 617 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 PNKPQ96T60 521 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 TRIM9Q9C026 710 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 ZNF518BQ9C0D4 1074 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 ELOVL4Q9GZR5 314 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 AGPAT3Q9NRZ7 376 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 TMEM30AQ9NV96 361 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 KBTBD4Q9NVX7 518 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 CFAP97Q9P2B7 532 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 MTMR6Q9Y217 621 aa13.22□□□□□ -0.29
CCDC57-208ENST00000475635 PATE3B3GLJ2 98 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 SGK1O00141 431 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 CLDN5O00501 218 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 CLIC2O15247 247 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 ALDH1A2O94788 518 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 KLF8O95600 359 aaPredicted RBP13.21□□□□□ -0.29
CCDC57-208ENST00000475635 ADH1CP00326 375 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 APODP05090 189 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 FAM163BP0C2L3 166 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 MBL2P11226 248 aaPredicted RBP13.21□□□□□ -0.29
CCDC57-208ENST00000475635 TIE1P35590 1138 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 NASPP49321 788 aaPredicted RBP13.21□□□□□ -0.29
CCDC57-208ENST00000475635 CYP2J2P51589 502 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 ASIC1P78348 528 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 CYP24A1Q07973 514 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 MESP2Q0VG99 397 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 PSMD6Q15008 389 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 STK38Q15208 465 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 E2F4Q16254 413 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 FAM26FQ5R3K3 315 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 SH3PXD2AQ5TCZ1 1133 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 RHBDF2Q6PJF5 856 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 DDX42Q86XP3 938 aaKnown RBP eCLIP13.21□□□□□ -0.29
CCDC57-208ENST00000475635 IL17RCQ8NAC3 791 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 RLN3Q8WXF3 142 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 PIGKQ92643 395 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 DHX58Q96C10 678 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 CGRRF1Q99675 332 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 B3GNT5Q9BYG0 378 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 ZSCAN16Q9H4T2 348 aaPredicted RBP13.21□□□□□ -0.29
CCDC57-208ENST00000475635 TMEM9BQ9NQ34 198 aa13.21□□□□□ -0.29
CCDC57-208ENST00000475635 CIZ1Q9ULV3 898 aaPredicted RBP13.21□□□□□ -0.29
CCDC57-208ENST00000475635 A8MXQ7 604 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 CHRM1P11229 460 aaPredicted RBP13.2□□□□□ -0.3
CCDC57-208ENST00000475635 ADH5P11766 374 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 YWHAQP27348 245 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 EIF2DP41214 584 aaKnown RBP13.2□□□□□ -0.3
CCDC57-208ENST00000475635 KIR2DL1P43626 348 aaPredicted RBP13.2□□□□□ -0.3
CCDC57-208ENST00000475635 MYL6P60660 151 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 IRX4P78413 519 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 AMPD3Q01432 767 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 KDSRQ06136 332 aa13.2□□□□□ -0.3
CCDC57-208ENST00000475635 ZNF252P-AS1Q0IIN9 211 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms