RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 CYP27A1Q02318 531 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 APBA1Q02410 837 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 CENPCQ03188 943 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 DSC1Q08554 894 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 ZNF268Q14587 947 aaPredicted RBP7.42□□□□□ -1.22
SHQ1-207ENST00000475558 ACAP1Q15027 740 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 NFE2Q16621 373 aaPredicted RBP7.42□□□□□ -1.22
SHQ1-207ENST00000475558 CLEC16AQ2KHT3 1053 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 SOWAHAQ2M3V2 549 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 PLPP4Q5VZY2 271 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 SPOPLQ6IQ16 392 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 LLGL2Q6P1M3 1020 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 TMC7Q7Z402 723 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 NOP9Q86U38 636 aaKnown RBP7.42□□□□□ -1.22
SHQ1-207ENST00000475558 ERICH1Q86X53 443 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 COLGALT2Q8IYK4 626 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 DCP1BQ8IZD4 617 aaKnown RBP7.42□□□□□ -1.22
SHQ1-207ENST00000475558 LRRC43Q8N309 656 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 TMEM105Q8N8V8 129 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 ANKRD52Q8NB46 1076 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 C1orf131Q8NDD1 294 aaKnown RBP7.42□□□□□ -1.22
SHQ1-207ENST00000475558 NKD2Q969F2 451 aaPredicted RBP7.42□□□□□ -1.22
SHQ1-207ENST00000475558 SUSD3Q96L08 255 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 CEP295NLQ96MC4 621 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 ZFP42Q96MM3 310 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 TRIM62Q9BVG3 475 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 APOL5Q9BWW9 433 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 ADAM7Q9H2U9 754 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 MFSD1Q9H3U5 465 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 CWH43Q9H720 699 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 ENTPD7Q9NQZ7 604 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 MIOSQ9NXC5 875 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 ADAM22Q9P0K1 906 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 GUCA1BQ9UMX6 200 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 EVPLQ92817 2033 aa7.42□□□□□ -1.22
SHQ1-207ENST00000475558 MYH11P35749 1972 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 OR6C75A6NL08 312 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 C2CD4DB7Z1M9 353 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 MYO1FO00160 1098 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 SART1O43290 800 aaKnown RBP7.41□□□□□ -1.22
SHQ1-207ENST00000475558 CYP1A2P05177 515 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 FGFR1P11362 822 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 CHRNB2P17787 502 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 PTPN1P18031 435 aaKnown RBP7.41□□□□□ -1.22
SHQ1-207ENST00000475558 SP100P23497 879 aaPredicted RBP7.41□□□□□ -1.22
SHQ1-207ENST00000475558 SCNN1AP37088 669 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 GGCXP38435 758 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 CETN2P41208 172 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 CLCNKBP51801 687 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 NDST1P52848 882 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 TERF1P54274 439 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 CDH8P55286 799 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 TSPY1Q01534 308 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 FMO1Q01740 532 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 SMC1AQ14683 1233 aaKnown RBP7.41□□□□□ -1.22
SHQ1-207ENST00000475558 MTF1Q14872 753 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 GLRA4Q5JXX5 417 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 ZNF569Q5MCW4 686 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 ZNF787Q6DD87 383 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 KCNT2Q6UVM3 1135 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 C4orf50Q6ZRC1 276 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 ARCQ7LC44 396 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 ADGRF2Q8IZF7 708 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 MCOLN2Q8IZK6 566 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 ZDHHC14Q8IZN3 488 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 MRPL43Q8N983 215 aaKnown RBP7.41□□□□□ -1.22
SHQ1-207ENST00000475558 SLC4A11Q8NBS3 891 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 ACRBPQ8NEB7 543 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 MYCBPAPQ8TBZ2 947 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 IPO4Q8TEX9 1081 aaKnown RBP7.41□□□□□ -1.22
SHQ1-207ENST00000475558 C2orf15Q8WU43 125 aaKnown RBP7.41□□□□□ -1.22
SHQ1-207ENST00000475558 RFFLQ8WZ73 363 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 KAT5Q92993 513 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 LPPQ93052 612 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 C18orf8Q96DM3 657 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 CYFIP2Q96F07 1278 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 ZNF558Q96NG5 402 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 CASD1Q96PB1 797 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 HNRNPABQ99729 332 aaKnown RBP7.41□□□□□ -1.22
SHQ1-207ENST00000475558 SELENOOQ9BVL4 669 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 POMKQ9H5K3 350 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 LZTFL1Q9NQ48 299 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 TBC1D13Q9NVG8 400 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 COMMD8Q9NX08 183 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 SPG21Q9NZD8 308 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 EHD2Q9NZN4 543 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 TUBGCP4Q9UGJ1 667 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 NENFQ9UMX5 172 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 INPP5FQ9Y2H2 1132 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.41□□□□□ -1.22
SHQ1-207ENST00000475558 GVINP1Q7Z2Y8 2422 aa7.41□□□□□ -1.22
SHQ1-207ENST00000475558 HIDE1A8MVS5 230 aa7.4□□□□□ -1.22
SHQ1-207ENST00000475558 MIF4GDA9UHW6 222 aaKnown RBP7.4□□□□□ -1.22
SHQ1-207ENST00000475558 CES2O00748 559 aa7.4□□□□□ -1.22
SHQ1-207ENST00000475558 ZNF263O14978 683 aa7.4□□□□□ -1.22
SHQ1-207ENST00000475558 FBXO21O94952 628 aa7.4□□□□□ -1.22
SHQ1-207ENST00000475558 C1RP00736 705 aa7.4□□□□□ -1.22
SHQ1-207ENST00000475558 GLI1P08151 1106 aa7.4□□□□□ -1.22
SHQ1-207ENST00000475558 MMEP08473 750 aa7.4□□□□□ -1.22
SHQ1-207ENST00000475558 TCP1P17987 556 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms