RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 B3GNT5Q9BYG0 378 aa13.04□□□□□ -0.32
RNF220-211ENST00000474956 MAF1Q9H063 256 aa13.04□□□□□ -0.32
RNF220-211ENST00000474956 GOLGA2P5Q9HBQ8 144 aa13.04□□□□□ -0.32
RNF220-211ENST00000474956 ETNK1Q9HBU6 452 aa13.04□□□□□ -0.32
RNF220-211ENST00000474956 GPATCH2LQ9NWQ4 482 aa13.04□□□□□ -0.32
RNF220-211ENST00000474956 FLRT1Q9NZU1 646 aa13.04□□□□□ -0.32
RNF220-211ENST00000474956 CPA4Q9UI42 421 aa13.04□□□□□ -0.32
RNF220-211ENST00000474956 PCDHGC3Q9UN70 934 aa13.04□□□□□ -0.32
RNF220-211ENST00000474956 TRIM33Q9UPN9 1127 aa13.04□□□□□ -0.32
RNF220-211ENST00000474956 CLGNO14967 610 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 MMP3P08254 477 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 TFE3P19532 575 aaPredicted RBP13.03□□□□□ -0.32
RNF220-211ENST00000474956 EIF4BP23588 611 aaKnown RBP13.03□□□□□ -0.32
RNF220-211ENST00000474956 AP3M2P53677 418 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 TMEM132DQ14C87 1099 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 ZNF618Q5T7W0 954 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 ANKRD22Q5VYY1 191 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 RELL1Q8IUW5 271 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 RIBC1Q8N443 379 aaPredicted RBP13.03□□□□□ -0.32
RNF220-211ENST00000474956 TMEM40Q8WWA1 233 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 MAML3Q96JK9 1138 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 TCRBV7S3A2A0A539 114 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 E5RJQ4 531 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 LSM8O95777 96 aaKnown RBP13.03□□□□□ -0.32
RNF220-211ENST00000474956 HOXA11P31270 313 aaPredicted RBP13.03□□□□□ -0.32
RNF220-211ENST00000474956 CDH5P33151 784 aaPredicted RBP13.03□□□□□ -0.32
RNF220-211ENST00000474956 SETDB1Q15047 1291 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 PARP6Q2NL67 630 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 ANKRD20A2Q5SQ80 823 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 ANKRD20A1Q5TYW2 823 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 ANKRD20A3Q5VUR7 823 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 ACTL9Q8TC94 416 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 TMEM176AQ96HP8 235 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 DPEP3Q9H4B8 488 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 NXF3Q9H4D5 531 aaKnown RBP13.03□□□□□ -0.32
RNF220-211ENST00000474956 KIF9Q9HAQ2 790 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 DPP3Q9NY33 737 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 GLTPD2A6NH11 291 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 FAM47DPA6NHR8 397 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 DYNC1LI2O43237 492 aaPredicted RBP13.03□□□□□ -0.32
RNF220-211ENST00000474956 CST8O60676 142 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 PFKMP08237 780 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 GPD2P43304 727 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 SLC26A2P50443 739 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 CCL14Q16627 93 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 ZNF484Q5JVG2 852 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 FAM102AQ5T9C2 384 aaPredicted RBP13.03□□□□□ -0.32
RNF220-211ENST00000474956 CEP128Q6ZU80 1094 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 ACOT1Q86TX2 421 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 ANKMY2Q8IV38 441 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 CCDC89Q8N998 374 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 NETO2Q8NC67 525 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 OR6J1Q8NGC5 347 aa13.03□□□□□ -0.32
RNF220-211ENST00000474956 RASA4BC9J798 803 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 SGK1O00141 431 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 LIN7AO14910 233 aaPredicted RBP13.02□□□□□ -0.32
RNF220-211ENST00000474956 RASA4O43374 803 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 GABBR2O75899 941 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 LUC7L3O95232 432 aaKnown RBP13.02□□□□□ -0.32
RNF220-211ENST00000474956 MIPP30301 263 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 ATXN1P54253 815 aaKnown RBP13.02□□□□□ -0.32
RNF220-211ENST00000474956 OTUD4Q01804 1114 aaKnown RBP13.02□□□□□ -0.32
RNF220-211ENST00000474956 LMNB2Q03252 620 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 TFDP3Q5H9I0 405 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.02□□□□□ -0.32
RNF220-211ENST00000474956 RCOR2Q8IZ40 523 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 ANKLE1Q8NAG6 615 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 CLEC4CQ8WTT0 213 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 CFAP57Q96MR6 1250 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 RBM15Q96T37 977 aaKnown RBP eCLIP13.02□□□□□ -0.32
RNF220-211ENST00000474956 RNF39Q9H2S5 420 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 SAYSD1Q9NPB0 183 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 EURLQ9NYK6 297 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.02□□□□□ -0.32
RNF220-211ENST00000474956 STARD13Q9Y3M8 1113 aa13.02□□□□□ -0.32
RNF220-211ENST00000474956 HGSO14964 777 aaPredicted RBP13.02□□□□□ -0.33
RNF220-211ENST00000474956 FOXN2P32314 431 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 RABGGTBP53611 331 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 BEX3Q00994 111 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 NR1H3Q13133 447 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 EFTUD2Q15029 972 aaKnown RBP eCLIP13.02□□□□□ -0.339e-7■■□□□ 11.4
RNF220-211ENST00000474956 MSS51Q4VC12 460 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 PPP1R26Q5T8A7 1209 aaPredicted RBP13.02□□□□□ -0.33
RNF220-211ENST00000474956 SESTD1Q86VW0 696 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
RNF220-211ENST00000474956 SPDL1Q96EA4 605 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 CALN1Q9BXU9 219 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 TSPAN16Q9UKR8 245 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 SNX9Q9Y5X1 595 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 BPTFQ12830 3046 aa13.02□□□□□ -0.33
RNF220-211ENST00000474956 YARSP54577 528 aaKnown RBP13.01□□□□□ -0.33
RNF220-211ENST00000474956 YWHAEP62258 255 aaKnown RBP13.01□□□□□ -0.33
RNF220-211ENST00000474956 OASLQ15646 514 aaKnown RBP13.01□□□□□ -0.33
RNF220-211ENST00000474956 FAM183BPQ6ZVS7 135 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 VSIG1Q86XK7 387 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 AGGF1Q8N302 714 aaeCLIP13.01□□□□□ -0.332e-6■■□□□ 11.5
RNF220-211ENST00000474956 FOXP3Q9BZS1 431 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 LRMDAQ9H2I8 198 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 NR2E3Q9Y5X4 410 aa13.01□□□□□ -0.33
RNF220-211ENST00000474956 USH1CQ9Y6N9 552 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms