RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TMEM174Q8WUU8 243 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 OSCP1Q8WVF1 389 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 NELL1Q92832 810 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 EEF2KMTQ96G04 330 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 TNIP3Q96KP6 325 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 P2RY13Q9BPV8 354 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 IMPG2Q9BZV3 1241 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 DNAI2Q9GZS0 605 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 HPS4Q9NQG7 708 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 CDV3Q9UKY7 258 aaKnown RBP16.08■□□□□ 0.16
VARS-223ENST00000474643 CTNND2Q9UQB3 1225 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 WNT6Q9Y6F9 365 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 ZNF292O60281 2723 aa16.08■□□□□ 0.16
VARS-223ENST00000474643 FANCMQ8IYD8 2048 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 BICDL2A1A5D9 508 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 C2orf78A6NCI8 922 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 TRIM49BA6NDI0 452 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 MAPK13O15264 365 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 TADA3O75528 432 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 NFATC1O95644 943 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 DRD1P21728 446 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 PIK3CAP42336 1068 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 DLG4P78352 724 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 FKBP3Q00688 224 aaKnown RBP16.07■□□□□ 0.16
VARS-223ENST00000474643 LMNB2Q03252 620 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 GAS6Q14393 721 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 ZCWPW2Q504Y3 356 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 PLEKHO2Q8TD55 490 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 NELFBQ8WX92 580 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 ZNF516Q92618 1163 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 RMDN1Q96DB5 314 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 NACA2Q9H009 215 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 ECT2Q9H8V3 914 aa16.07■□□□□ 0.16
VARS-223ENST00000474643 RNF40O75150 1001 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 STAU1O95793 577 aaKnown RBP16.06■□□□□ 0.16
VARS-223ENST00000474643 FAM163BP0C2L3 166 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 CCDC192P0DO97 292 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 CD44P16070 742 aaKnown RBP16.06■□□□□ 0.16
VARS-223ENST00000474643 PFKLP17858 780 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 ZNF77Q15935 545 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 DCAF17Q5H9S7 520 aaPredicted RBP16.06■□□□□ 0.16
VARS-223ENST00000474643 TMEM196Q5HYL7 178 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 TCERG1LQ5VWI1 586 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 LIMS2Q7Z4I7 341 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 CCDC150Q8NCX0 1101 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 CCDC26Q8TAB7 109 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 CD101Q93033 1021 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 C8orf48Q96LL4 319 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 SLC22A12Q96S37 553 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 ZNF518BQ9C0D4 1074 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 DPEP3Q9H4B8 488 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 SMYD3Q9H7B4 428 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 SMPD4Q9NXE4 827 aa16.06■□□□□ 0.16
VARS-223ENST00000474643 PRR5-ARHGAP8B1AHC4 643 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 CLDN5O00501 218 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 TRDMT1O14717 391 aaKnown RBP16.05■□□□□ 0.16
VARS-223ENST00000474643 SLC9A3R1O14745 358 aaPredicted RBP16.05■□□□□ 0.16
VARS-223ENST00000474643 IKBKBO14920 756 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 RTN3O95197 1032 aaPredicted RBP16.05■□□□□ 0.16
VARS-223ENST00000474643 PAPSS2O95340 614 aaPredicted RBP16.05■□□□□ 0.16
VARS-223ENST00000474643 EGFP01133 1207 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 TRIM49P0CI25 452 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 TRIM49CP0CI26 452 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 TDGF1P13385 188 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 GJA4P35212 333 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 RAP1GAPP47736 663 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 PMS1P54277 932 aaKnown RBP16.05■□□□□ 0.16
VARS-223ENST00000474643 STX17P56962 302 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 NOP14P78316 857 aaKnown RBP16.05■□□□□ 0.16
VARS-223ENST00000474643 ARHGAP8P85298 464 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 DMWDQ09019 674 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 SPEM2Q0P670 501 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 USP4Q13107 963 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 PAK1Q13153 545 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 RSPO4Q2I0M5 234 aaPredicted RBP16.05■□□□□ 0.16
VARS-223ENST00000474643 CCDC40Q4G0X9 1142 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 FBXO43Q4G163 708 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 PDZD8Q8NEN9 1154 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 FBXO32Q969P5 355 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 ACDQ96AP0 544 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 ARHGAP26Q9UNA1 814 aa16.05■□□□□ 0.16
VARS-223ENST00000474643 OBSL1O75147 1896 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 KIF26AQ9ULI4 1882 aaPredicted RBP16.04■□□□□ 0.16
VARS-223ENST00000474643 PPP1R3GB7ZBB8 358 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 LEFTY2O00292 366 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 SLC16A3O15427 465 aaKnown RBP16.04■□□□□ 0.16
VARS-223ENST00000474643 STX10O60499 249 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 C4BPAP04003 597 aaKnown RBP16.04■□□□□ 0.16
VARS-223ENST00000474643 RETP07949 1114 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 MBL2P11226 248 aaPredicted RBP16.04■□□□□ 0.16
VARS-223ENST00000474643 BMP6P22004 513 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 YWHAQP27348 245 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 GCLMP48507 274 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 CDH8P55286 799 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 USP46P62068 366 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 TAF10Q12962 218 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 SRSF5Q13243 272 aaKnown RBP16.04■□□□□ 0.16
VARS-223ENST00000474643 SGSM1Q2NKQ1 1148 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 KLHL40Q2TBA0 621 aa16.04■□□□□ 0.16
VARS-223ENST00000474643 FSTL4Q6MZW2 842 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms