RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CCDC150Q8NCX0 1101 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 NGDNQ8NEJ9 315 aaKnown RBP3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 SOCS4Q8WXH5 440 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 ATG4AQ8WYN0 398 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 UROC1Q96N76 676 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 TIMP4Q99727 224 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 CHST8Q9H2A9 424 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 HEYLQ9NQ87 328 aaPredicted RBP3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 FOXJ2Q9P0K8 574 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 RNF7Q9UBF6 113 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 TLK1Q9UKI8 766 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 ITGB1BP2Q9UKP3 347 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 CORO2BQ9UQ03 480 aa3.96□□□□□ -1.78
ECHDC1-213ENST00000474240 CCDC194A0A1B0GVG4 234 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 POM121BA6NF01 834 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 RASA4BC9J798 803 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 ADM5C9JUS6 153 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 APAF1O14727 1248 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 PPM1DO15297 605 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 RASA4O43374 803 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 RGS10O43665 173 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 RRP9O43818 475 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 PROP1O75360 226 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 PIAS2O75928 621 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 TJP3O95049 919 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 RASAL1O95294 804 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 CSF1RP07333 972 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 IFIT2P09913 472 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 PIK3CBP42338 1070 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 STT3AP46977 705 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 PTDSS1P48651 473 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 HNRNPMP52272 730 aaKnown RBP eCLIP3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 SUMO2P61956 95 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 SIM1P81133 766 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 AARS2Q5JTZ9 985 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 FBXO42Q6P3S6 717 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 UNC13DQ70J99 1090 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 KRT28Q7Z3Y7 464 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 PEG10Q86TG7 708 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 COL23A1Q86Y22 540 aaPredicted RBP3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 IZUMO1Q8IYV9 350 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 ABRAQ8N0Z2 381 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 CCDC33Q8N5R6 958 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 ACRBPQ8NEB7 543 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 SVIPQ8NHG7 77 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 TFAP2BQ92481 460 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 RFKQ969G6 155 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 PPP2R3CQ969Q6 453 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 ZDHHC12Q96GR4 267 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 MYD88Q99836 296 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 SELENOOQ9BVL4 669 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 APOL5Q9BWW9 433 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 MAGEB5Q9BZ81 275 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 ARHGEF3Q9NR81 526 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 SERTAD4Q9NUC0 356 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 DNMT3BQ9UBC3 853 aaKnown RBP3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 MID2Q9UJV3 735 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 USP22Q9UPT9 525 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 SSX2IPQ9Y2D8 614 aa3.95□□□□□ -1.78
ECHDC1-213ENST00000474240 A0A1W2PPC4 97 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 A1L4Q6 167 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 TMEM233B4DJY2 109 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 RAB27BO00194 218 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 QSOX1O00391 747 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 APOL1O14791 398 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 HNRNPDLO14979 420 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 CD3EAPO15446 510 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 SNX2O60749 519 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 SRGAP2O75044 1071 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 RHOP08100 348 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 IL6RP08887 468 aaPredicted RBP3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 NPSP0C0P6 89 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 NR2F6P10588 404 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 IL1R1P14778 569 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 TSHRP16473 764 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 GPD1P21695 349 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 LIPAP38571 399 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 PRIM2P49643 509 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 COPAP53621 1224 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 TIAL1Q01085 375 aaKnown RBP eCLIP3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 CLCA4Q14CN2 919 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 BRD3Q15059 726 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 ST3GAL2Q16842 350 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 LONRF1Q17RB8 773 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 ZNF750Q32MQ0 723 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 C4orf46Q504U0 113 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 PARS2Q7L3T8 475 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 ZNF280BQ86YH2 543 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 OR2C3Q8N628 320 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 SIMC1Q8NDZ2 872 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 GJA10Q969M2 543 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 CCDC138Q96M89 665 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 ELAC2Q9BQ52 826 aaKnown RBP3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 NLRC4Q9NPP4 1024 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 MYO1AQ9UBC5 1043 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 DKK4Q9UBT3 224 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 PHTF1Q9UMS5 762 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 GABRQQ9UN88 632 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 FRMD4BQ9Y2L6 1034 aa3.94□□□□□ -1.78
ECHDC1-213ENST00000474240 hCG_1984214I3L0E3 225 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms