RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 MAMSTRQ6ZN01 415 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 FILIP1Q7Z7B0 1213 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 TTC39CQ8N584 583 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 TTC16Q8NEE8 873 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 PDZD8Q8NEN9 1154 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 SCAMP5Q8TAC9 235 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 RIN3Q8TB24 985 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 SH3RF2Q8TEC5 729 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 WHAMMQ8TF30 809 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 CYFIP2Q96F07 1278 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 CEP63Q96MT8 703 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 TWNKQ96RR1 684 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 HNRNPABQ99729 332 aaKnown RBP11.86□□□□□ -0.51
CKS1B-206ENST00000474215 SMOQ99835 787 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 DUSP9Q99956 384 aaKnown RBP11.86□□□□□ -0.51
CKS1B-206ENST00000474215 RNF38Q9H0F5 515 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 CHRDQ9H2X0 955 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 EBF3Q9H4W6 596 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 METTL14Q9HCE5 456 aaKnown RBP11.86□□□□□ -0.51
CKS1B-206ENST00000474215 HPS4Q9NQG7 708 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 KRT82Q9NSB4 513 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 FAM49BQ9NUQ9 324 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 COMMD8Q9NX08 183 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 DUS2Q9NX74 493 aaKnown RBP11.86□□□□□ -0.51
CKS1B-206ENST00000474215 IL37Q9NZH6 218 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 CHORDC1Q9UHD1 332 aaPredicted RBP11.86□□□□□ -0.51
CKS1B-206ENST00000474215 ARHGAP26Q9UNA1 814 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 COQ4Q9Y3A0 265 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 CACNA1HO95180 2353 aa11.86□□□□□ -0.51
CKS1B-206ENST00000474215 ZFHX2Q9C0A1 2572 aaPredicted RBP11.85□□□□□ -0.51
CKS1B-206ENST00000474215 NUP210Q8TEM1 1887 aaPredicted RBP11.85□□□□□ -0.51
CKS1B-206ENST00000474215 BICDL2A1A5D9 508 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 OTOL1A6NHN0 477 aaPredicted RBP11.85□□□□□ -0.51
CKS1B-206ENST00000474215 GFRA3O60609 400 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 BEST1O76090 585 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 ARSAP15289 507 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 MAP3K7CLP57077 242 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 SLC7A9P82251 487 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 AMPD2Q01433 879 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 CSTF1Q05048 431 aaKnown RBP11.85□□□□□ -0.51
CKS1B-206ENST00000474215 LRRC32Q14392 662 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 ZNF77Q15935 545 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 CBWD6Q4V339 395 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 CBWD3Q5JTY5 395 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 DGKKQ5KSL6 1271 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 CBWD5Q5RIA9 395 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 TRIM68Q6AZZ1 485 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 KLHL10Q6JEL2 608 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 TTI2Q6NXR4 508 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 FOXR2Q6PJQ5 311 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 ZMIZ2Q8NF64 920 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 OSCP1Q8WVF1 389 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 NELFBQ8WX92 580 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 OVCA2Q8WZ82 227 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 TATDN2Q93075 761 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 NKD2Q969F2 451 aaPredicted RBP11.85□□□□□ -0.51
CKS1B-206ENST00000474215 FBXO32Q969P5 355 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 SLC35C1Q96A29 364 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 IER2Q9BTL4 223 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 SEMA4AQ9H3S1 761 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 FAM124BQ9H5Z6 455 aaPredicted RBP11.85□□□□□ -0.51
CKS1B-206ENST00000474215 COL4A2P08572 1712 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 WDR87Q6ZQQ6 2873 aa11.85□□□□□ -0.51
CKS1B-206ENST00000474215 TICRRQ7Z2Z1 1910 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 VPS13AQ96RL7 3174 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 FAM92AA1XBS5 289 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 OLFM2O95897 454 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 OAS1P00973 400 aaKnown RBP11.84□□□□□ -0.51
CKS1B-206ENST00000474215 FAM200BP0CF97 657 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 ADORA2BP29275 332 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 ANP32AP39687 249 aaKnown RBP11.84□□□□□ -0.51
CKS1B-206ENST00000474215 SLC5A3P53794 718 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 ZXDBP98169 803 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 USP4Q13107 963 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 PON2Q15165 354 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 CAMK4Q16566 473 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 ZNF394Q53GI3 561 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 SNX30Q5VWJ9 437 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 ASCL5Q7RTU5 278 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 CPA6Q8N4T0 437 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 KIAA1958Q8N8K9 716 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 ATP2A3Q93084 1043 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 HEXIM2Q96MH2 286 aaKnown RBP11.84□□□□□ -0.51
CKS1B-206ENST00000474215 ARID3AQ99856 593 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 LINC00597Q9H2U6 94 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 FBXO44Q9H4M3 255 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 CISHQ9NSE2 258 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 WNT6Q9Y6F9 365 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 R4GN57 208 aa11.84□□□□□ -0.51
CKS1B-206ENST00000474215 PRR23AA6NEV1 266 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 LEFTY2O00292 366 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 TRDMT1O14717 391 aaKnown RBP11.83□□□□□ -0.52
CKS1B-206ENST00000474215 ZDHHC11BP0C7U3 371 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 IFNAR2P48551 515 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 NR1H3Q13133 447 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 CCINQ13939 588 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 EML3Q32P44 896 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 CCDC40Q4G0X9 1142 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 HECTD3Q5T447 861 aa11.83□□□□□ -0.52
CKS1B-206ENST00000474215 ZC3H14Q6PJT7 736 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms