RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 PTPN1P18031 435 aaKnown RBP14.26□□□□□ -0.13
COPS7B-219ENST00000474042 PMLP29590 882 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 GNL1P36915 607 aaPredicted RBP14.26□□□□□ -0.13
COPS7B-219ENST00000474042 TNNC1P63316 161 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 PSMD2Q13200 908 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 WDR72Q3MJ13 1102 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 TCEAL6Q6IPX3 200 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 FILIP1Q7Z7B0 1213 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 NELFCDQ8IXH7 590 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 RDH13Q8NBN7 331 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 B3GALNT2Q8NCR0 500 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 TSTD1Q8NFU3 115 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 OR6B3Q8NGW1 331 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 ZNF516Q92618 1163 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 TCEAL3Q969E4 200 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 CCDC127Q96BQ5 260 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 ZNF396Q96N95 335 aaPredicted RBP14.26□□□□□ -0.13
COPS7B-219ENST00000474042 RNF38Q9H0F5 515 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 VRTNQ9H8Y1 702 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 CGNQ9P2M7 1197 aaKnown RBP14.26□□□□□ -0.13
COPS7B-219ENST00000474042 MMP17Q9ULZ9 603 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 ABCA7Q8IZY2 2146 aa14.26□□□□□ -0.13
COPS7B-219ENST00000474042 BCLAF3A2AJT9 711 aaKnown RBP14.25□□□□□ -0.13
COPS7B-219ENST00000474042 ANTXRLA6NF34 631 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 RHOBTB1O94844 696 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 CASP1P29466 404 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 ATICP31939 592 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 EIF2DP41214 584 aaKnown RBP14.25□□□□□ -0.13
COPS7B-219ENST00000474042 DGKEP52429 567 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 MYL6P60660 151 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 TAF10Q12962 218 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 PMS2CLQ68D20 193 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 HS2ST1Q7LGA3 356 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 C11orf74Q86VG3 221 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 PLEKHO2Q8TD55 490 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 CNOT6LQ96LI5 555 aaKnown RBP14.25□□□□□ -0.13
COPS7B-219ENST00000474042 SLITRK1Q96PX8 696 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 B3GNT5Q9BYG0 378 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 SMYD3Q9H7B4 428 aa14.25□□□□□ -0.13
COPS7B-219ENST00000474042 TFIP11Q9UBB9 837 aaKnown RBP14.25□□□□□ -0.13
COPS7B-219ENST00000474042 CLDN5O00501 218 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 SLC9A3R1O14745 358 aaPredicted RBP14.24□□□□□ -0.13
COPS7B-219ENST00000474042 KRT37O76014 449 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 KCNA4P22459 653 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 SEC13P55735 322 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 MRPS21P82921 87 aaKnown RBP14.24□□□□□ -0.13
COPS7B-219ENST00000474042 MESP2Q0VG99 397 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 DHCR24Q15392 516 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 TDRD10Q5VZ19 366 aaKnown RBP14.24□□□□□ -0.13
COPS7B-219ENST00000474042 FAM35AQ86V20 835 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 C12orf40Q86WS4 652 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 DDX42Q86XP3 938 aaKnown RBP eCLIP14.24□□□□□ -0.13
COPS7B-219ENST00000474042 SFTPA1Q8IWL2 248 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 ADGRG2Q8IZP9 1017 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 PDZD8Q8NEN9 1154 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 MDGA1Q8NFP4 955 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 OVCA2Q8WZ82 227 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 SYAP1Q96A49 352 aaPredicted RBP14.24□□□□□ -0.13
COPS7B-219ENST00000474042 ZFRQ96KR1 1074 aaKnown RBP14.24□□□□□ -0.13
COPS7B-219ENST00000474042 EDEM2Q9BV94 578 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 LSM14BQ9BX40 385 aaKnown RBP14.24□□□□□ -0.13
COPS7B-219ENST00000474042 TPSD1Q9BZJ3 242 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 SMPD4Q9NXE4 827 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 CFAP97Q9P2B7 532 aa14.24□□□□□ -0.13
COPS7B-219ENST00000474042 PVALEFA0A1B0GWK0 134 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 A8MXQ7 604 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 SCAMP3O14828 347 aaKnown RBP14.23□□□□□ -0.13
COPS7B-219ENST00000474042 POLR2DO15514 142 aaKnown RBP14.23□□□□□ -0.13
COPS7B-219ENST00000474042 RTN3O95197 1032 aaPredicted RBP14.23□□□□□ -0.13
COPS7B-219ENST00000474042 CAVIN2O95810 425 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 HNRNPLP14866 589 aaKnown RBP eCLIP14.23□□□□□ -0.13
COPS7B-219ENST00000474042 BCKDHBP21953 392 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 CASP4P49662 377 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 CLDN10P78369 228 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 SHC2P98077 582 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 CREB5Q02930 508 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 TRPC3Q13507 836 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 CRY1Q16526 586 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 ST3GAL2Q16842 350 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 KNOP1Q1ED39 458 aaKnown RBP14.23□□□□□ -0.13
COPS7B-219ENST00000474042 HSF5Q4G112 596 aaPredicted RBP14.23□□□□□ -0.13
COPS7B-219ENST00000474042 C2orf27AQ580R0 203 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 N4BP2L1Q5TBK1 243 aaPredicted RBP14.23□□□□□ -0.13
COPS7B-219ENST00000474042 RNF43Q68DV7 783 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 ANO7Q6IWH7 933 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 NUP93Q8N1F7 819 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 PHTF2Q8N3S3 785 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 OLIG1Q8TAK6 271 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 FBXO32Q969P5 355 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 DUSP9Q99956 384 aaKnown RBP14.23□□□□□ -0.13
COPS7B-219ENST00000474042 BLZF1Q9H2G9 400 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 SLC39A2Q9NP94 309 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 IL37Q9NZH6 218 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 NXF1Q9UBU9 619 aaKnown RBP14.23□□□□□ -0.13
COPS7B-219ENST00000474042 ANGPTL2Q9UKU9 493 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 MYH10P35580 1976 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 LAMA1P25391 3075 aa14.23□□□□□ -0.13
COPS7B-219ENST00000474042 ATP8B3O60423 1300 aa14.22□□□□□ -0.13
COPS7B-219ENST00000474042 A0A0A0MRY4 1105 aa14.22□□□□□ -0.13
COPS7B-219ENST00000474042 E2F8A0AVK6 867 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms