RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 TANGO2Q6ICL3 276 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 GBP6Q6ZN66 633 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 ITIH5Q86UX2 942 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 TTC30AQ86WT1 665 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 RIN3Q8TB24 985 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 NXPE3Q969Y0 559 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 TRMT2BQ96GJ1 504 aaKnown RBP13.9□□□□□ -0.18
TPM3-216ENST00000473036 SMARCD1Q96GM5 515 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 HEXIM2Q96MH2 286 aaKnown RBP13.9□□□□□ -0.18
TPM3-216ENST00000473036 ASB16Q96NS5 453 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 SLC22A12Q96S37 553 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 MED10Q9BTT4 135 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 TTLL2Q9BWV7 592 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 SLC46A2Q9BY10 475 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 GPR88Q9GZN0 384 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 ATXN3LQ9H3M9 355 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 UBE2TQ9NPD8 197 aaPredicted RBP13.9□□□□□ -0.18
TPM3-216ENST00000473036 IL37Q9NZH6 218 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 LIMA1Q9UHB6 759 aaKnown RBP13.9□□□□□ -0.18
TPM3-216ENST00000473036 DUSP12Q9UNI6 340 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 CNTN6Q9UQ52 1028 aa13.9□□□□□ -0.18
TPM3-216ENST00000473036 LRRC10BA6NIK2 292 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 ZNF197O14709 1029 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 TRIM66O15016 1216 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 PNMA6AP0CW24 399 aaPredicted RBP13.89□□□□□ -0.19
TPM3-216ENST00000473036 CSH1P0DML2 217 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 CSH2P0DML3 217 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 TBXAS1P24557 533 aaPredicted RBP13.89□□□□□ -0.19
TPM3-216ENST00000473036 VIPR2P41587 438 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 COPB1P53618 953 aaKnown RBP13.89□□□□□ -0.19
TPM3-216ENST00000473036 CETN1Q12798 172 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 VEPH1Q14D04 833 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 ARHGAP17Q68EM7 881 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 CWF19L1Q69YN2 538 aaKnown RBP13.89□□□□□ -0.19
TPM3-216ENST00000473036 TMEM270Q6UE05 265 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 DENND5BQ6ZUT9 1274 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 SLC44A3Q8N4M1 653 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 LEMD2Q8NC56 503 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 KXD1Q9BQD3 176 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 NAA15Q9BXJ9 866 aaKnown RBP13.89□□□□□ -0.19
TPM3-216ENST00000473036 SMG9Q9H0W8 520 aaKnown RBP13.89□□□□□ -0.19
TPM3-216ENST00000473036 FAM124BQ9H5Z6 455 aaPredicted RBP13.89□□□□□ -0.19
TPM3-216ENST00000473036 CBX8Q9HC52 389 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 GDE1Q9NZC3 331 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 APEX2Q9UBZ4 518 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 PCDHB4Q9Y5E5 795 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 ZFP37Q9Y6Q3 630 aaPredicted RBP13.89□□□□□ -0.19
TPM3-216ENST00000473036 MYO16Q9Y6X6 1858 aa13.89□□□□□ -0.19
TPM3-216ENST00000473036 DMXL1Q9Y485 3027 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 O00370 1275 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 EPHB6O15197 1021 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 GABBR2O75899 941 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 PRAMEF12O95522 483 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 CFHP08603 1231 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 ZNF165P49910 485 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 ANGPT1Q15389 498 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 PKDCCQ504Y2 493 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 GPR158Q5T848 1215 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 TXNDC8Q6A555 127 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 NUP93Q8N1F7 819 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 DTWD2Q8NBA8 298 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 RBBP8NLQ8NC74 664 aaPredicted RBP13.88□□□□□ -0.19
TPM3-216ENST00000473036 ZSCAN18Q8TBC5 510 aaPredicted RBP13.88□□□□□ -0.19
TPM3-216ENST00000473036 DUSP16Q9BY84 665 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 DMAP1Q9NPF5 467 aaPredicted RBP13.88□□□□□ -0.19
TPM3-216ENST00000473036 WNT16Q9UBV4 365 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 SIK3Q9Y2K2 1263 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 KIF26AQ9ULI4 1882 aaPredicted RBP13.88□□□□□ -0.19
TPM3-216ENST00000473036 FRYLO94915 3013 aa13.88□□□□□ -0.19
TPM3-216ENST00000473036 COL4A2P08572 1712 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 FAM92AA1XBS5 289 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 C2orf78A6NCI8 922 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 FAM200BP0CF97 657 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 NPR3P17342 541 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 BRD2P25440 801 aaKnown RBP13.87□□□□□ -0.19
TPM3-216ENST00000473036 SLC5A3P53794 718 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 ZXDBP98169 803 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 TAF10Q12962 218 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 ARHGAP44Q17R89 818 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 GOLGA7BQ2TAP0 167 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 KLHDC7AQ5VTJ3 777 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 ZC3H14Q6PJT7 736 aaKnown RBP13.87□□□□□ -0.19
TPM3-216ENST00000473036 LUZP1Q86V48 1076 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 TTC39CQ8N584 583 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 FLCNQ8NFG4 579 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 UBA3Q8TBC4 463 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 SHC3Q92529 594 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 SMARCD2Q92925 531 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 JAKMIP2Q96AA8 810 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 CEP295NLQ96MC4 621 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 CYP2S1Q96SQ9 504 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 GANQ9H2C0 597 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 TRPV4Q9HBA0 871 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 TSPAN16Q9UKR8 245 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 FBXL21Q9UKT6 434 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 CCL26Q9Y258 94 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 FHOD1Q9Y613 1164 aa13.87□□□□□ -0.19
TPM3-216ENST00000473036 HELZP42694 1942 aaKnown RBP13.87□□□□□ -0.19
TPM3-216ENST00000473036 ZNF840PA6NDX5 716 aa13.86□□□□□ -0.19
TPM3-216ENST00000473036 GOLGA6L19H0YKK7 550 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms