RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 LEFTY2O00292 366 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 MAPK13O15264 365 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 RHOBTB3O94955 611 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 KIF20AO95235 890 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 RETP07949 1114 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 DPYDQ12882 1025 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 NR1H3Q13133 447 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 SRSF5Q13243 272 aaKnown RBP16.26■□□□□ 0.19
VTI1A-203ENST00000472892 LPAL2Q16609 132 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 FBXO43Q4G163 708 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 C1orf220Q5T0J3 134 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 NAIF1Q69YI7 327 aaPredicted RBP16.26■□□□□ 0.19
VTI1A-203ENST00000472892 HEATR6Q6AI08 1181 aaKnown RBP16.26■□□□□ 0.19
VTI1A-203ENST00000472892 PRR23BQ6ZRT6 265 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 PAQR9Q6ZVX9 377 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 SV2AQ7L0J3 742 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 NUP93Q8N1F7 819 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 TTC16Q8NEE8 873 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 TAF4BQ92750 862 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 TNIP3Q96KP6 325 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 KCNK16Q96T55 309 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 SCAND2PQ9GZW5 306 aaPredicted RBP16.26■□□□□ 0.19
VTI1A-203ENST00000472892 ATP6V1DQ9Y5K8 247 aa16.26■□□□□ 0.19
VTI1A-203ENST00000472892 PTPRDP23468 1912 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 ANAPC1Q9H1A4 1944 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 CCDC163A0A0D9SF12 145 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 CALUO43852 315 aaPredicted RBP16.25■□□□□ 0.19
VTI1A-203ENST00000472892 RNF40O75150 1001 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 OAS1P00973 400 aaKnown RBP16.25■□□□□ 0.19
VTI1A-203ENST00000472892 YWHAQP27348 245 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 RAP1GAPP47736 663 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 NFIL3Q16649 462 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 RSPO4Q2I0M5 234 aaPredicted RBP16.25■□□□□ 0.19
VTI1A-203ENST00000472892 CEP135Q66GS9 1140 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 KRBA2Q6ZNG9 492 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 CRYBG2Q8N1P7 616 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 OVCA2Q8WZ82 227 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 EZH1Q92800 747 aaPredicted RBP16.25■□□□□ 0.19
VTI1A-203ENST00000472892 CD101Q93033 1021 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 ELMO3Q96BJ8 720 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 SLITRK1Q96PX8 696 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 PARD6AQ9NPB6 346 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 IL37Q9NZH6 218 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 FRMD4BQ9Y2L6 1034 aa16.25■□□□□ 0.19
VTI1A-203ENST00000472892 ATP8B3O60423 1300 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 PRR5-ARHGAP8B1AHC4 643 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 TNFRSF10BO14763 440 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 LRP3O75074 770 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 RTN3O95197 1032 aaPredicted RBP16.24■□□□□ 0.19
VTI1A-203ENST00000472892 NFATC1O95644 943 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 ABL1P00519 1130 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 ASS1P00966 412 aaKnown RBP16.24■□□□□ 0.19
VTI1A-203ENST00000472892 P4HA1P13674 534 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 ARHGAP8P85298 464 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 LMNB2Q03252 620 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 SNX30Q5VWJ9 437 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 DGLUCYQ7Z3D6 616 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 ADGRG2Q8IZP9 1017 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 FUKQ8N0W3 1084 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 CAMKK1Q8N5S9 505 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 CCDC47Q96A33 483 aaKnown RBP16.24■□□□□ 0.19
VTI1A-203ENST00000472892 COMMD8Q9NX08 183 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 SLC8A2Q9UPR5 921 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 CPQQ9Y646 472 aa16.24■□□□□ 0.19
VTI1A-203ENST00000472892 FAM92AA1XBS5 289 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 AKAP3O75969 853 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 SDHBP21912 280 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 VASPP50552 380 aaPredicted RBP16.23■□□□□ 0.19
VTI1A-203ENST00000472892 VAMP7P51809 220 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 MCCD1P59942 119 aaPredicted RBP16.23■□□□□ 0.19
VTI1A-203ENST00000472892 ENPEPQ07075 957 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 SPEM2Q0P670 501 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 GAB4Q2WGN9 574 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 SCARA5Q6ZMJ2 495 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 ACOT1Q86TX2 421 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 FAM35AQ86V20 835 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 UNC93AQ86WB7 457 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 GUF1Q8N442 669 aaKnown RBP16.23■□□□□ 0.19
VTI1A-203ENST00000472892 PDZD8Q8NEN9 1154 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 SMARCD1Q96GM5 515 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 MED10Q9BTT4 135 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 GOLPH3LQ9H4A5 285 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 DMAP1Q9NPF5 467 aaPredicted RBP16.23■□□□□ 0.19
VTI1A-203ENST00000472892 CHORDC1Q9UHD1 332 aaPredicted RBP16.23■□□□□ 0.19
VTI1A-203ENST00000472892 USP18Q9UMW8 372 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 GTF3C3Q9Y5Q9 886 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 CACNA1AO00555 2505 aa16.23■□□□□ 0.19
VTI1A-203ENST00000472892 CEP250Q9BV73 2442 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 SLC9A3R1O14745 358 aaPredicted RBP16.22■□□□□ 0.19
VTI1A-203ENST00000472892 CLSTN1O94985 981 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 ZNF202O95125 648 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 HLA-DRAP01903 254 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 ZDHHC11BP0C7U3 371 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 NR2F2P24468 414 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 OPRD1P41143 372 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 ASPAP45381 313 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 PXNP49023 591 aaPredicted RBP16.22■□□□□ 0.19
VTI1A-203ENST00000472892 NDST1P52848 882 aa16.22■□□□□ 0.19
VTI1A-203ENST00000472892 IFRD2Q12894 506 aaPredicted RBP16.22■□□□□ 0.19
VTI1A-203ENST00000472892 SPOPLQ6IQ16 392 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms