RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 TCHHQ07283 1943 aa20.61■□□□□ 0.89
COMMD1-208ENST00000472729 BIN1O00499 593 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 GADD45BO75293 160 aaPredicted RBP20.6■□□□□ 0.89
COMMD1-208ENST00000472729 CCR3P51677 355 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 SLC5A3P53794 718 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 CACNA2D1P54289 1103 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 NRLP54845 237 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 MAP3K7CLP57077 242 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 SLC8A3P57103 927 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 PON2Q15165 354 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 ZNF528Q3MIS6 628 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 TRIM68Q6AZZ1 485 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 DDX42Q86XP3 938 aaKnown RBP eCLIP20.6■□□□□ 0.89
COMMD1-208ENST00000472729 FUKQ8N0W3 1084 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 C12orf29Q8N999 325 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 CYFIP2Q96F07 1278 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 CEP63Q96MT8 703 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 SLC22A12Q96S37 553 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 FAM83CQ9BQN1 747 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 CHRDQ9H2X0 955 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 APOBEC3GQ9HC16 384 aaKnown RBP20.6■□□□□ 0.89
COMMD1-208ENST00000472729 GCNT4Q9P109 453 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 HMGXB4Q9UGU5 601 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 R4GN57 208 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 KMT2EQ8IZD2 1858 aa20.6■□□□□ 0.89
COMMD1-208ENST00000472729 TRIM49BA6NDI0 452 aa20.59■□□□□ 0.89
COMMD1-208ENST00000472729 MBL2P11226 248 aaPredicted RBP20.59■□□□□ 0.89
COMMD1-208ENST00000472729 PMS1P54277 932 aaKnown RBP20.59■□□□□ 0.89
COMMD1-208ENST00000472729 YWHAEP62258 255 aaKnown RBP20.59■□□□□ 0.89
COMMD1-208ENST00000472729 INCA1Q0VD86 236 aa20.59■□□□□ 0.89
COMMD1-208ENST00000472729 ZNF394Q53GI3 561 aa20.59■□□□□ 0.89
COMMD1-208ENST00000472729 NELFBQ8WX92 580 aa20.59■□□□□ 0.89
COMMD1-208ENST00000472729 CHORDC1Q9UHD1 332 aaPredicted RBP20.59■□□□□ 0.89
COMMD1-208ENST00000472729 SLC9A3R1O14745 358 aaPredicted RBP20.58■□□□□ 0.89
COMMD1-208ENST00000472729 NFATC1O95644 943 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 FGFR1OPO95684 399 aaKnown RBP20.58■□□□□ 0.89
COMMD1-208ENST00000472729 LMNAP02545 664 aaKnown RBP20.58■□□□□ 0.89
COMMD1-208ENST00000472729 CHRNB1P11230 501 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 CXCL12P48061 93 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 ZNF77Q15935 545 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 HECTD3Q5T447 861 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 FILIP1Q7Z7B0 1213 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 SYNPOQ8N3V7 929 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 SCAMP5Q8TAC9 235 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 JAKMIP2Q96AA8 810 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 HNRNPABQ99729 332 aaKnown RBP20.58■□□□□ 0.89
COMMD1-208ENST00000472729 HINFPQ9BQA5 517 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 FAM126AQ9BYI3 521 aaPredicted RBP20.58■□□□□ 0.89
COMMD1-208ENST00000472729 SMPD4Q9NXE4 827 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 WNT6Q9Y6F9 365 aa20.58■□□□□ 0.89
COMMD1-208ENST00000472729 LEFTY2O00292 366 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 CILPO75339 1184 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 ARSAP15289 507 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 SLC7A9P82251 487 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 FZD5Q13467 585 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 TXNDC11Q6PKC3 985 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 PAQR9Q6ZVX9 377 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 SPEM1Q8N4L4 309 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 SEMA4DQ92854 862 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 FAM124BQ9H5Z6 455 aaPredicted RBP20.57■□□□□ 0.88
COMMD1-208ENST00000472729 ECT2Q9H8V3 914 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 TLR8Q9NR97 1041 aaKnown RBP20.57■□□□□ 0.88
COMMD1-208ENST00000472729 CISHQ9NSE2 258 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 ZSCAN32Q9NX65 697 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 CTNND2Q9UQB3 1225 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 PCDHGA2Q9Y5H1 932 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 CPQQ9Y646 472 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 PIEZO1Q92508 2521 aa20.57■□□□□ 0.88
COMMD1-208ENST00000472729 PRR23AA6NEV1 266 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 SHISA7A6NL88 538 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 ATG13O75143 517 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 GNA14O95837 355 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 GOLGA8FQ08AF8 430 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 GOLGA8DPQ0D2H9 430 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 USP4Q13107 963 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 PAK1Q13153 545 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 CAMK4Q16566 473 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 TRIML1Q8N9V2 468 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 CCDC26Q8TAB7 109 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 TMEM176AQ96HP8 235 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 SMOQ99835 787 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 P2RY13Q9BPV8 354 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 CSNK1G1Q9HCP0 422 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 HPS4Q9NQG7 708 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 RBM12Q9NTZ6 932 aaKnown RBP20.56■□□□□ 0.88
COMMD1-208ENST00000472729 TMEM30AQ9NV96 361 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 SH3BP1Q9Y3L3 701 aa20.56■□□□□ 0.88
COMMD1-208ENST00000472729 CACNA1HO95180 2353 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 TCF3P15923 654 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 ACO1P21399 889 aaKnown RBP20.55■□□□□ 0.88
COMMD1-208ENST00000472729 DRD1P21728 446 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 TBXAS1P24557 533 aaPredicted RBP20.55■□□□□ 0.88
COMMD1-208ENST00000472729 MCCD1P59942 119 aaPredicted RBP20.55■□□□□ 0.88
COMMD1-208ENST00000472729 MORC3Q14149 939 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 CBWD6Q4V339 395 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 CBWD3Q5JTY5 395 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 CBWD5Q5RIA9 395 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 TSSK4Q6SA08 328 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 MAMSTRQ6ZN01 415 aa20.55■□□□□ 0.88
COMMD1-208ENST00000472729 ASCL5Q7RTU5 278 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms