RNA–Protein interactions for RNA: ENST00000472673.5

COMMD3-211, Transcript of COMM domain containing 3, human

TSL 3

Gene COMMD3, Length 237 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD3-211	ENST00000472673	PROSER3	Q2NL68	480 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	TBC1D25	Q3MII6	688 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	L1TD1	Q5T7N2	865 aa	Known RBP	4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	PRAMEF17	Q5VTA0	474 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	KCTD20	Q7Z5Y7	419 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	HDAC9	Q9UKV0	1011 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	GABRQ	Q9UN88	632 aa		4.61	□□□□□ -1.67
COMMD3-211	ENST00000472673	LOC102723971	A0A1B0GUV8	181 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673		H7C4K7	107 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	AP4M1	O00189	453 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	PSMD9	O00233	223 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	RGS10	O43665	173 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	TJP3	O95049	919 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	HRG	P04196	525 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	PRKCB	P05771	671 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	NHLRC4	P0CG21	123 aa	Predicted RBP	4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	MYF5	P13349	255 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	PEX2	P28328	305 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	BCAT1	P54687	386 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	HOXA4	Q00056	320 aa	Predicted RBP	4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	E2F1	Q01094	437 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	CYP1B1	Q16678	543 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	TRIM72	Q6ZMU5	477 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	SESTD1	Q86VW0	696 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	FMNL3	Q8IVF7	1028 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	CYP2W1	Q8TAV3	490 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	DAZAP1	Q96EP5	407 aa	Known RBP	4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	APIP	Q96GX9	242 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	LENG8	Q96PV6	779 aa	Predicted RBP	4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	XPNPEP3	Q9NQH7	507 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	PRDM11	Q9NQV5	511 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	COL20A1	Q9P218	1284 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	DNMT3B	Q9UBC3	853 aa	Known RBP	4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	TNFRSF18	Q9Y5U5	241 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	FER1L4	A9Z1Z3	1794 aa		4.6	□□□□□ -1.67
COMMD3-211	ENST00000472673	TISP43	B9A030	160 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	RAB27B	O00194	218 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	CCP110	O43303	1012 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	EXOC3	O60645	756 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	LMO1	P25800	156 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	PTDSS1	P48651	473 aa	Known RBP	4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	MTHFS	P49914	203 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	KIAA1614	Q5VZ46	1190 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	MTHFD1L	Q6UB35	978 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	PRR25	Q96S07	402 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	METTL14	Q9HCE5	456 aa	Known RBP	4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	FLRT1	Q9NZU1	646 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	ITGB1BP2	Q9UKP3	347 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	DRG1	Q9Y295	367 aa	Known RBP	4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	PCDHGB6	Q9Y5F9	930 aa		4.59	□□□□□ -1.67
COMMD3-211	ENST00000472673	DNAJC9-AS1	A6NH13	148 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	CES2	O00748	559 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	CD3EAP	O15446	510 aa	Known RBP	4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	RRP9	O43818	475 aa	Known RBP	4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	PIAS2	O75928	621 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	CELA2A	P08217	269 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	CYP2D6	P10635	497 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	RHCE	P18577	417 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	FPR3	P25089	353 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	ACVR2A	P27037	513 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	EPHA3	P29320	983 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	GK	P32189	559 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	TUBA4A	P68366	448 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	RHD	Q02161	417 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	ARHGEF7	Q14155	803 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	GALE	Q14376	348 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	SLC29A2	Q14542	456 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	FCRL6	Q6DN72	434 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	KIRREL2	Q6UWL6	708 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	ZNF66	Q6ZN08	573 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	CHSY1	Q86X52	802 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	YAF2	Q8IY57	180 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	SIRT6	Q8N6T7	355 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	VGLL2	Q8N8G2	317 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	TERB1	Q8NA31	727 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	PNLDC1	Q8NA58	520 aa	Known RBP	4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	SMCR8	Q8TEV9	937 aa	Predicted RBP	4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	TIFA	Q96CG3	184 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	RSPRY1	Q96DX4	576 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	ZBTB45	Q96K62	511 aa	Predicted RBP	4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	THAP7	Q9BT49	309 aa	Predicted RBP	4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	APOL5	Q9BWW9	433 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	TRIM5	Q9C035	493 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	CIPC	Q9C0C6	399 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	CHST8	Q9H2A9	424 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	MID2	Q9UJV3	735 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	USP22	Q9UPT9	525 aa		4.58	□□□□□ -1.68
COMMD3-211	ENST00000472673	PRRT4	C9JH25	899 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	PMPCB	O75439	489 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	TXN	P10599	105 aa	Known RBP	4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	HGF	P14210	728 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	IL1R1	P14778	569 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	MPG	P29372	298 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	UQCRC1	P31930	480 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	SUMO2	P61956	95 aa	Known RBP	4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	SEMA5A	Q13591	1074 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	NPY5R	Q15761	445 aa		4.57	□□□□□ -1.68
COMMD3-211	ENST00000472673	EZH2	Q15910	746 aa	Known RBP	4.57	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms