RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	KATNAL2	Q8IYT4	538 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SIX6OS1	Q8N1H7	587 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	LRRC43	Q8N309	656 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	TMEM199	Q8N511	208 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	RNF25	Q96BH1	459 aa	Predicted RBP	11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SMARCD1	Q96GM5	515 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	B3GALT6	Q96L58	329 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	CFAP57	Q96MR6	1250 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	KCNK16	Q96T55	309 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	CNPY3	Q9BT09	278 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	GPR62	Q9BZJ7	368 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	MCOLN1	Q9GZU1	580 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	MARCH5	Q9NX47	278 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	PCSK1N	Q9UHG2	260 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	NR2E1	Q9Y466	385 aa		11.3	□□□□□ -0.6
MRPS18B-208	ENST00000472267	VWA8	A3KMH1	1905 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	TCRBV7S2A1N4T	A0A589	114 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	LRCH4	O75427	683 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ZMYND10	O75800	440 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ZRANB2	O95218	330 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	AMH	P03971	560 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	GALT	P07902	379 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SDC4	P31431	198 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	RPL34	P49207	117 aa	Known RBP	11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	TKTL1	P51854	596 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	DEFB103A	P81534	67 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ATP11A	P98196	1134 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	MAPRE1	Q15691	268 aa	Known RBP	11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	HADH	Q16836	314 aa	Known RBP	11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SMTNL2	Q2TAL5	461 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	CCDC14	Q49A88	953 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SLC39A12	Q504Y0	691 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	VARS2	Q5ST30	1063 aa	Known RBP	11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SH3PXD2A	Q5TCZ1	1133 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	TXNRD3NB	Q6F5E7	133 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	MFSD5	Q6N075	450 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	FUT10	Q6P4F1	479 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	FBXO38	Q6PIJ6	1188 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ARFGAP1	Q8N6T3	406 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ZMIZ2	Q8NF64	920 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	HDAC7	Q8WUI4	952 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	KCTD13	Q8WZ19	329 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	FAM149B1	Q96BN6	582 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	PKMYT1	Q99640	499 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	TMEM175	Q9BSA9	504 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	HEMGN	Q9BXL5	484 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	DDX47	Q9H0S4	455 aa	Known RBP	11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	TMEM30A	Q9NV96	361 aa		11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ARGLU1	Q9NWB6	273 aa	Predicted RBP	11.29	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.29	□□□□□ -0.6	3e-9	■■■■■ 206.8
MRPS18B-208	ENST00000472267	CCDC188	H7C350	402 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SYN3	O14994	580 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	DGKI	O75912	1065 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	OAZ2	O95190	189 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	DES	P17661	470 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	IL1R2	P27930	398 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	MIP	P30301	263 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	CETN2	P41208	172 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ARPP19	P56211	112 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SLC25A11	Q02978	314 aa	Known RBP	11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	CTXN3	Q4LDR2	81 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	RAB6C	Q53S08	254 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	EFHC1	Q5JVL4	640 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	LRRC38	Q5VT99	294 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	KAZN	Q674X7	775 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SCYL2	Q6P3W7	929 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	C4orf50	Q6ZRC1	276 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SLC26A9	Q7LBE3	791 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	GPRIN1	Q7Z2K8	1008 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	TMEM173	Q86WV6	379 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	DCP1B	Q8IZD4	617 aa	Known RBP	11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	EXD1	Q8NHP7	514 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ULBP1	Q9BZM6	244 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	RAB6C	Q9H0N0	254 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	NGRN	Q9NPE2	291 aa	Known RBP	11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	DDX56	Q9NY93	547 aa	Known RBP	11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ABI2	Q9NYB9	513 aa	Predicted RBP	11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	MTUS1	Q9ULD2	1270 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	LTBP2	Q14767	1821 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	NLRC5	Q86WI3	1866 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	PTPRD	P23468	1912 aa		11.28	□□□□□ -0.6
MRPS18B-208	ENST00000472267	TARSL2	A2RTX5	802 aa	Known RBP	11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	LRRD1	A4D1F6	860 aa		11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	DPYSL4	O14531	572 aa		11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	RAD51C	O43502	376 aa		11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	CAPN15	O75808	1086 aa		11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	TRUB2	O95900	331 aa	Known RBP	11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	KRT7	P08729	469 aa		11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	RARA	P10276	462 aa		11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	RALA	P11233	206 aa		11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	H2AFX	P16104	143 aa	Predicted RBP	11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	SCNN1A	P37088	669 aa		11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ALDH7A1	P49419	539 aa	Known RBP	11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	VSNL1	P62760	191 aa		11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	MRPS5	P82675	430 aa	Known RBP	11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ADCY1	Q08828	1119 aa		11.27	□□□□□ -0.6
MRPS18B-208	ENST00000472267	ACAP1	Q15027	740 aa		11.27	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms