RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 LMO2P25791 158 aa21.15■□□□□ 0.98
CCDC78-208ENST00000471861 EIF2DP41214 584 aaKnown RBP21.15■□□□□ 0.98
CCDC78-208ENST00000471861 LHX1P48742 406 aa21.15■□□□□ 0.98
CCDC78-208ENST00000471861 PDE6CP51160 858 aa21.15■□□□□ 0.98
CCDC78-208ENST00000471861 HSF5Q4G112 596 aaPredicted RBP21.15■□□□□ 0.98
CCDC78-208ENST00000471861 CSGALNACT2Q8N6G5 542 aa21.15■□□□□ 0.98
CCDC78-208ENST00000471861 HVCN1Q96D96 273 aa21.15■□□□□ 0.98
CCDC78-208ENST00000471861 POLMQ9NP87 494 aaPredicted RBP21.15■□□□□ 0.98
CCDC78-208ENST00000471861 RBAKQ9NYW8 714 aaPredicted RBP21.15■□□□□ 0.98
CCDC78-208ENST00000471861 BCCIPQ9P287 314 aaKnown RBP eCLIP21.15■□□□□ 0.98
CCDC78-208ENST00000471861 MYMKA6NI61 221 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 OAS1P00973 400 aaKnown RBP21.14■□□□□ 0.97
CCDC78-208ENST00000471861 HOXD12P35452 270 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 RESTQ13127 1097 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 POSTNQ15063 836 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 EOGTQ5NDL2 527 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 LMBRD2Q68DH5 695 aaPredicted RBP21.14■□□□□ 0.97
CCDC78-208ENST00000471861 VSTM1Q6UX27 236 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 DENND5BQ6ZUT9 1274 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 RAB44Q7Z6P3 723 aaPredicted RBP21.14■□□□□ 0.97
CCDC78-208ENST00000471861 DEFB119Q8N690 84 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 GTPBP2Q9BX10 602 aaKnown RBP21.14■□□□□ 0.97
CCDC78-208ENST00000471861 ARHGEF4Q9NR80 690 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 TRPM5Q9NZQ8 1165 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 MYOFQ9NZM1 2061 aa21.14■□□□□ 0.97
CCDC78-208ENST00000471861 PTPRJQ12913 1337 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 TULP1O00294 542 aaPredicted RBP21.13■□□□□ 0.97
CCDC78-208ENST00000471861 APODP05090 189 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 KRT19P08727 400 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 CD59P13987 128 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 C4orf50Q6ZRC1 276 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 DYMQ7RTS9 669 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 KIAA1958Q8N8K9 716 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 PDE11AQ9HCR9 933 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 TMEM30AQ9NV96 361 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 CFAP97Q9P2B7 532 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 MAGEC2Q9UBF1 373 aaPredicted RBP21.13■□□□□ 0.97
CCDC78-208ENST00000471861 HCN2Q9UL51 889 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 SLC6A14Q9UN76 642 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 GPSM3Q9Y4H4 160 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 NME7Q9Y5B8 376 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 ADAMTS20P59510 1910 aa21.13■□□□□ 0.97
CCDC78-208ENST00000471861 GOLGA8IPA6NC78 632 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 GOLGA8JA6NMD2 632 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 SERPINF2P08697 491 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 ADH5P11766 374 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 DDIT3P35638 169 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 GRIK1P39086 918 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 GRIA2P42262 883 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 CASP5P51878 434 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 CACNA2D1P54289 1103 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 RBP5P82980 135 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 DUOXA1Q1HG43 343 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 L1TD1Q5T7N2 865 aaKnown RBP21.12■□□□□ 0.97
CCDC78-208ENST00000471861 MINDY1Q8N5J2 469 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 CACTINQ8WUQ7 758 aaKnown RBP21.12■□□□□ 0.97
CCDC78-208ENST00000471861 CBWD1Q9BRT8 395 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 FGFBP2Q9BYJ0 223 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 CDH9Q9ULB4 789 aa21.12■□□□□ 0.97
CCDC78-208ENST00000471861 H0Y626 953 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 OPHN1O60890 802 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 TRIM16O95361 564 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 GABRG2P18507 467 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 DPP6P42658 865 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 RPL6Q02878 288 aaKnown RBP21.11■□□□□ 0.97
CCDC78-208ENST00000471861 LY6G5CQ5SRR4 150 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 SLC41A1Q8IVJ1 513 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 ETFBKMTQ8IXQ9 262 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 PGBD3Q8N328 593 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 HDDC3Q8N4P3 179 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 KRI1Q8N9T8 703 aaKnown RBP21.11■□□□□ 0.97
CCDC78-208ENST00000471861 RASSF8Q8NHQ8 419 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 PCED1BQ96HM7 432 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 ZFRQ96KR1 1074 aaKnown RBP21.11■□□□□ 0.97
CCDC78-208ENST00000471861 CEP295NLQ96MC4 621 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 CAMK1GQ96NX5 476 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 TBC1D7Q9P0N9 293 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 CALCOCO1Q9P1Z2 691 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 CEP192Q8TEP8 1941 aa21.11■□□□□ 0.97
CCDC78-208ENST00000471861 F8VP50 259 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 SLC9A3R1O14745 358 aaPredicted RBP21.1■□□□□ 0.97
CCDC78-208ENST00000471861 AP5Z1O43299 807 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 ADH1CP00326 375 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 LONP1P36776 959 aaKnown RBP21.1■□□□□ 0.97
CCDC78-208ENST00000471861 TNFRSF4P43489 277 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 ATXN3P54252 364 aaPredicted RBP21.1■□□□□ 0.97
CCDC78-208ENST00000471861 NOP14P78316 857 aaKnown RBP21.1■□□□□ 0.97
CCDC78-208ENST00000471861 CYP27A1Q02318 531 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 GFPT1Q06210 699 aaPredicted RBP21.1■□□□□ 0.97
CCDC78-208ENST00000471861 C19orf48Q6RUI8 117 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 USP49Q70CQ1 688 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 MIB1Q86YT6 1006 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 OR5B17Q8NGF7 314 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 CEP76Q8TAP6 659 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 MRPL44Q9H9J2 332 aaKnown RBP21.1■□□□□ 0.97
CCDC78-208ENST00000471861 CD248Q9HCU0 757 aa21.1■□□□□ 0.97
CCDC78-208ENST00000471861 GJB3O75712 270 aa21.09■□□□□ 0.97
CCDC78-208ENST00000471861 PDGFRBP09619 1106 aa21.09■□□□□ 0.97
CCDC78-208ENST00000471861 TMEM191BP0C7N4 346 aa21.09■□□□□ 0.97
CCDC78-208ENST00000471861 GARTP22102 1010 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms