RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 RNPEPQ9H4A4 650 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 CXorf36Q9H7Y0 433 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 KCND3Q9UK17 655 aa7.54□□□□□ -1.2
SMC5-202ENST00000471372 C19orf53Q9UNZ5 99 aaPredicted RBP7.54□□□□□ -1.2
SMC5-202ENST00000471372 A0A087X0M5 115 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 PNMA6EA0A0J9YXQ4 647 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 A0A1B0GX30 115 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 ZSCAN9O15535 394 aaPredicted RBP7.53□□□□□ -1.2
SMC5-202ENST00000471372 B4GALT4O60513 344 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 LRPAP1P30533 357 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 NTSR1P30989 418 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 LOXL3P58215 753 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 NUCB1Q02818 461 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 PIGFQ07326 219 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 FHL3Q13643 280 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 KRT32Q14532 448 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 RPS6KA2Q15349 733 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 NEK10Q6ZWH5 1172 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 FBXO15Q8NCQ5 510 aaPredicted RBP7.53□□□□□ -1.2
SMC5-202ENST00000471372 REEP2Q9BRK0 252 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 GBA2Q9HCG7 927 aaPredicted RBP7.53□□□□□ -1.2
SMC5-202ENST00000471372 DNAJB11Q9UBS4 358 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 VPS51Q9UID3 782 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 CNTN6Q9UQ52 1028 aa7.53□□□□□ -1.2
SMC5-202ENST00000471372 RRP7AQ9Y3A4 280 aaKnown RBP7.53□□□□□ -1.2
SMC5-202ENST00000471372 LMTK3Q96Q04 1460 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 ANKRD18BA2A2Z9 1011 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 FFAR3O14843 346 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 CD3EAPO15446 510 aaKnown RBP7.52□□□□□ -1.21
SMC5-202ENST00000471372 RPP40O75818 363 aaKnown RBP7.52□□□□□ -1.21
SMC5-202ENST00000471372 CNPP09543 421 aaKnown RBP7.52□□□□□ -1.21
SMC5-202ENST00000471372 GNAT2P19087 354 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 GCSHP23434 173 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 RRM1P23921 792 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 PRKAG1P54619 331 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 RAC3P60763 192 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 SATB1Q01826 763 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 SMAD1Q15797 465 aaKnown RBP7.52□□□□□ -1.21
SMC5-202ENST00000471372 GALNTL6Q49A17 601 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 ATG16L1Q676U5 607 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 TMEM108Q6UXF1 575 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 ZNF761Q86XN6 746 aaPredicted RBP7.52□□□□□ -1.21
SMC5-202ENST00000471372 SYT12Q8IV01 421 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 ELOA2Q8IYF1 753 aaPredicted RBP7.52□□□□□ -1.21
SMC5-202ENST00000471372 POC1BQ8TC44 478 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 TMEM176AQ96HP8 235 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 FAM53CQ9NYF3 392 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 DNAJC16Q9Y2G8 782 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 DERAQ9Y315 318 aa7.52□□□□□ -1.21
SMC5-202ENST00000471372 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.52□□□□□ -1.21
SMC5-202ENST00000471372 CCDC196A0A1B0GTZ2 297 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 FSD2A1L4K1 749 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 CCDC78A2IDD5 438 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 KIF28PB7ZC32 967 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 AGPSO00116 658 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 ETV2O00321 342 aaPredicted RBP7.51□□□□□ -1.21
SMC5-202ENST00000471372 USO1O60763 962 aaKnown RBP7.51□□□□□ -1.21
SMC5-202ENST00000471372 RTN3O95197 1032 aaPredicted RBP7.51□□□□□ -1.21
SMC5-202ENST00000471372 HK1P19367 917 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 YY1P25490 414 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 MAGEA10P43363 369 aaPredicted RBP7.51□□□□□ -1.21
SMC5-202ENST00000471372 ZNF844Q08AG5 666 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 HAUS3Q68CZ6 603 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 ACAD10Q6JQN1 1059 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 SPARTQ8N0X7 666 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 OR52N2Q8NGI0 321 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 TDRD7Q8NHU6 1098 aaKnown RBP7.51□□□□□ -1.21
SMC5-202ENST00000471372 ZNF483Q8TF39 744 aaPredicted RBP7.51□□□□□ -1.21
SMC5-202ENST00000471372 TMEM171Q8WVE6 324 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 ZBTB45Q96K62 511 aaPredicted RBP7.51□□□□□ -1.21
SMC5-202ENST00000471372 NEU1Q99519 415 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 TRIM5Q9C035 493 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 ABHD16BQ9H3Z7 469 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 NOD2Q9HC29 1040 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 HSFX1Q9UBD0 423 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 ORC3Q9UBD5 711 aaPredicted RBP7.51□□□□□ -1.21
SMC5-202ENST00000471372 PI4KBQ9UBF8 816 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 OAZ3Q9UMX2 235 aa7.51□□□□□ -1.21
SMC5-202ENST00000471372 CCDC195A0A1B0GUA6 201 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 PGPEP1LA6NFU8 196 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 ADM5C9JUS6 153 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 F5H0A9 414 aaPredicted RBP7.5□□□□□ -1.21
SMC5-202ENST00000471372 STX16-NPEPL1H3BU86 382 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 STX16O14662 325 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 CDC14BO60729 498 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 CYP21A2P08686 494 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 SPATA31D3P0C874 917 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 SERPINA4P29622 427 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 MC2RQ01718 297 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 TSTQ16762 297 aaKnown RBP7.5□□□□□ -1.21
SMC5-202ENST00000471372 DRICH1Q6PGQ1 229 aaPredicted RBP7.5□□□□□ -1.21
SMC5-202ENST00000471372 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.5□□□□□ -1.21
SMC5-202ENST00000471372 SPATA31D4Q6ZUB0 917 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 OR8H2Q8N162 312 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 ABHD5Q8WTS1 349 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 WDR60Q8WVS4 1066 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 ST8SIA2Q92186 375 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 CPT1BQ92523 772 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 MCRS1Q96EZ8 462 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms