RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 CSTBP04080 98 aaKnown RBP6.63□□□□□ -1.35
CKS1B-204ENST00000471245 HSPA1AP0DMV8 641 aaKnown RBP6.63□□□□□ -1.35
CKS1B-204ENST00000471245 HSPA1BP0DMV9 641 aaKnown RBP6.63□□□□□ -1.35
CKS1B-204ENST00000471245 VIPR2P41587 438 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 ALDH9A1P49189 494 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 PPM1FP49593 454 aaPredicted RBP6.63□□□□□ -1.35
CKS1B-204ENST00000471245 UCP3P55916 312 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 POU5F1BQ06416 359 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 AMOTQ4VCS5 1084 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 CCDC38Q502W7 563 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 FAM160B1Q5W0V3 765 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 C10orf71Q711Q0 1435 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 SLC15A4Q8N697 577 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 RNF169Q8NCN4 708 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 MDGA1Q8NFP4 955 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 TBC1D15Q8TC07 691 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 NUP133Q8WUM0 1156 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 PALLDQ8WX93 1383 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 IP6K1Q92551 441 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 SPSB4Q96A44 273 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 LTV1Q96GA3 475 aaPredicted RBP6.63□□□□□ -1.35
CKS1B-204ENST00000471245 TEPSINQ96N21 525 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 CPEB1Q9BZB8 566 aaKnown RBP6.63□□□□□ -1.35
CKS1B-204ENST00000471245 CHST8Q9H2A9 424 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 USP40Q9NVE5 1235 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 PLA2G3Q9NZ20 509 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 ZNF212Q9UDV6 495 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 AGAP1Q9UPQ3 857 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 SLC30A1Q9Y6M5 507 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 COL5A3P25940 1745 aaPredicted RBP6.62□□□□□ -1.35
CKS1B-204ENST00000471245 TIAM2Q8IVF5 1701 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 NSD3Q9BZ95 1437 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 PLEKHG2Q9H7P9 1386 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 OTOL1A6NHN0 477 aaPredicted RBP6.62□□□□□ -1.35
CKS1B-204ENST00000471245 E9PLN8 166 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 NPHP1O15259 732 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 MFAP3LO75121 409 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 INMTO95050 263 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 ITGB1P05556 798 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 CYP2C9P11712 490 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 XRCC6P12956 609 aaKnown RBP eCLIP6.62□□□□□ -1.35
CKS1B-204ENST00000471245 CCT5P48643 541 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 ELAVL1Q15717 326 aaKnown RBP6.62□□□□□ -1.35
CKS1B-204ENST00000471245 ELF2Q15723 593 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 TAX1BP1Q86VP1 789 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 YAF2Q8IY57 180 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 MPP5Q8N3R9 675 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 VGLL2Q8N8G2 317 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 SYT8Q8NBV8 401 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 ZNF384Q8TF68 577 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 MOGAT1Q96PD6 335 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 GDF15Q99988 308 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 VKORC1Q9BQB6 163 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 UBA5Q9GZZ9 404 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 MYLK2Q9H1R3 596 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 XPR1Q9UBH6 696 aa6.62□□□□□ -1.35
CKS1B-204ENST00000471245 EDC4Q6P2E9 1401 aaKnown RBP6.61□□□□□ -1.35
CKS1B-204ENST00000471245 A0A0G2JLW4 131 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 PPFIA4O75335 1185 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 RAD17O75943 681 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 FDXRP22570 491 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 GCSHP23434 173 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 SLC6A2P23975 617 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 HMGB2P26583 209 aaKnown RBP6.61□□□□□ -1.35
CKS1B-204ENST00000471245 IL1R2P27930 398 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 PDIA3P30101 505 aaKnown RBP6.61□□□□□ -1.35
CKS1B-204ENST00000471245 PTTG1IPP53801 180 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 SLFN5Q08AF3 891 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 ZACNQ401N2 412 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 LDHAL6AQ6ZMR3 332 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 ZNF354CQ86Y25 554 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 ZFPM1Q8IX07 1006 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 CACNA2D3Q8IZS8 1091 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 MYCT1Q8N699 235 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 PDPRQ8NCN5 879 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 SLC17A8Q8NDX2 589 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 FEZF2Q8TBJ5 459 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 PNISRQ8TF01 805 aaKnown RBP6.61□□□□□ -1.35
CKS1B-204ENST00000471245 TMEM176AQ96HP8 235 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 OR14A2Q96R54 314 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 RMDN3Q96TC7 470 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 STK31Q9BXU1 1019 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 MAGEB5Q9BZ81 275 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 IMPG2Q9BZV3 1241 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 DHX36Q9H2U1 1008 aaKnown RBP6.61□□□□□ -1.35
CKS1B-204ENST00000471245 NECTIN3Q9NQS3 549 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 HESX1Q9UBX0 185 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 ITGB1BP2Q9UKP3 347 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 SLC39A10Q9ULF5 831 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 MAN2B2Q9Y2E5 1009 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 ZNF831Q5JPB2 1677 aa6.61□□□□□ -1.35
CKS1B-204ENST00000471245 DRGXA6NNA5 263 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 TMEM233B4DJY2 109 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 CCP110O43303 1012 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 A1BGP04217 495 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 MMP10P09238 476 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 HOXA5P20719 270 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 HOXC9P31274 260 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 RENBPP51606 427 aa6.6□□□□□ -1.35
CKS1B-204ENST00000471245 TGFB2P61812 414 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms