RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 PKNOX2Q96KN3 472 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 TTPALQ9BTX7 342 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 SELENOOQ9BVL4 669 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 HERC2P3Q9BVR0 1158 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 VN1R3Q9BXE9 311 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 TRIM7Q9C029 511 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 TMEM30AQ9NV96 361 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 ASNSD1Q9NWL6 643 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 PSD3Q9NYI0 1048 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 SPG21Q9NZD8 308 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 CXXC1Q9P0U4 656 aaPredicted RBP9.37□□□□□ -0.91
LMCD1-207ENST00000470776 CALCOCO1Q9P1Z2 691 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 STK39Q9UEW8 545 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 INSL6Q9Y581 213 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 NR2E3Q9Y5X4 410 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 DNAH12Q6ZR08 3092 aa9.37□□□□□ -0.91
LMCD1-207ENST00000470776 COL6A3P12111 3177 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 FNDC1Q4ZHG4 1894 aaPredicted RBP9.36□□□□□ -0.91
LMCD1-207ENST00000470776 C2CD4BA6NLJ0 364 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 DPYSL4O14531 572 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 NCK2O43639 380 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 AP1G2O75843 785 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 FBXO21O94952 628 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 SOD2P04179 222 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 GLI1P08151 1106 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 CTNNA1P35221 906 aaKnown RBP9.36□□□□□ -0.91
LMCD1-207ENST00000470776 RFC1P35251 1148 aaPredicted RBP9.36□□□□□ -0.91
LMCD1-207ENST00000470776 PBX3P40426 434 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 RGS7P49802 495 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 PEX5P50542 639 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 CACNA2D1P54289 1103 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 DSG1Q02413 1049 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 ITIH3Q06033 890 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 ADCY1Q08828 1119 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 ZNF252P-AS1Q0IIN9 211 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 PIGHQ14442 188 aaPredicted RBP9.36□□□□□ -0.91
LMCD1-207ENST00000470776 CTXN3Q4LDR2 81 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 RTP2Q5QGT7 225 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 LRRC38Q5VT99 294 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 OR6B2Q6IFH4 312 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 SLC8B1Q6J4K2 584 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 WDR93Q6P2C0 686 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 VSTM1Q6UX27 236 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 TAS1R1Q7RTX1 841 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 ZNF572Q7Z3I7 529 aaPredicted RBP9.36□□□□□ -0.91
LMCD1-207ENST00000470776 TMCO2Q7Z6W1 182 aaPredicted RBP9.36□□□□□ -0.91
LMCD1-207ENST00000470776 PHLDB2Q86SQ0 1253 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 DDX53Q86TM3 631 aaKnown RBP9.36□□□□□ -0.91
LMCD1-207ENST00000470776 CREG2Q8IUH2 290 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 HERC6Q8IVU3 1022 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 RASGEF1CQ8N431 466 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 JOSD2Q8TAC2 188 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.36□□□□□ -0.91
LMCD1-207ENST00000470776 DPF3Q92784 378 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 BTBD6Q96KE9 485 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 C8orf48Q96LL4 319 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 OSBPL9Q96SU4 736 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 RAD9AQ99638 391 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 MED10Q9BTT4 135 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 PARD6BQ9BYG5 372 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 MTIF3Q9H2K0 278 aaKnown RBP9.36□□□□□ -0.91
LMCD1-207ENST00000470776 GOLPH3Q9H4A6 298 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 SYNCQ9H7C4 482 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 VIPAS39Q9H9C1 493 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 CNGB3Q9NQW8 809 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 ST7Q9NRC1 585 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 AAASQ9NRG9 546 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 KRT82Q9NSB4 513 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 ZNF446Q9NWS9 450 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 MTRRQ9UBK8 725 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 TTC7AQ9ULT0 858 aaPredicted RBP9.36□□□□□ -0.91
LMCD1-207ENST00000470776 PCDHA3Q9Y5H8 950 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 USP3Q9Y6I4 520 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 SLC4A7Q9Y6M7 1214 aa9.36□□□□□ -0.91
LMCD1-207ENST00000470776 TSC2P49815 1807 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 ALPK3Q96L96 1907 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 FAM170AA1A519 330 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 GOLGA8SH3BPF8 625 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 TNFRSF10BO14763 440 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 SART1O43290 800 aaKnown RBP9.35□□□□□ -0.91
LMCD1-207ENST00000470776 LILRB3O75022 631 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 GJB6O95452 261 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 BDNFP23560 247 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 PPM1AP35813 382 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 ZNF143P52747 638 aaPredicted RBP9.35□□□□□ -0.91
LMCD1-207ENST00000470776 MAP3K7CLP57077 242 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 MRPS5P82675 430 aaKnown RBP9.35□□□□□ -0.91
LMCD1-207ENST00000470776 EFHC1Q5JVL4 640 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 PRPF38BQ5VTL8 546 aaKnown RBP9.35□□□□□ -0.91
LMCD1-207ENST00000470776 PM20D1Q6GTS8 502 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 DCUN1D2Q6PH85 259 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 RSPO2Q6UXX9 243 aaPredicted RBP9.35□□□□□ -0.91
LMCD1-207ENST00000470776 BEND5Q7L4P6 421 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 SPATA2LQ8IUW3 424 aaPredicted RBP9.35□□□□□ -0.91
LMCD1-207ENST00000470776 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 FIBCD1Q8N539 461 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 SPPL2BQ8TCT7 592 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 ACTRT1Q8TDG2 376 aa9.35□□□□□ -0.91
LMCD1-207ENST00000470776 COG1Q8WTW3 980 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms