RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 OR56A3Q8NH54 315 aa6.52□□□□□ -1.37
COL11A1-208ENST00000470170 DNAJB14Q8TBM8 379 aa6.52□□□□□ -1.37
COL11A1-208ENST00000470170 RUNDC1Q96C34 613 aa6.52□□□□□ -1.37
COL11A1-208ENST00000470170 ZNF48Q96MX3 618 aaPredicted RBP6.52□□□□□ -1.37
COL11A1-208ENST00000470170 MMS19Q96T76 1030 aa6.52□□□□□ -1.37
COL11A1-208ENST00000470170 KLHL13Q9P2N7 655 aa6.52□□□□□ -1.37
COL11A1-208ENST00000470170 NOB1Q9ULX3 412 aaKnown RBP6.52□□□□□ -1.37
COL11A1-208ENST00000470170 USP19O94966 1318 aa6.51□□□□□ -1.37
COL11A1-208ENST00000470170 ZNF521Q96K83 1311 aa6.51□□□□□ -1.37
COL11A1-208ENST00000470170 PRPF3O43395 683 aaKnown RBP6.51□□□□□ -1.37
COL11A1-208ENST00000470170 MOSPD3O75425 235 aa6.51□□□□□ -1.37
COL11A1-208ENST00000470170 CYP2A6P11509 494 aaPredicted RBP6.51□□□□□ -1.37
COL11A1-208ENST00000470170 PTGER1P34995 402 aa6.51□□□□□ -1.37
COL11A1-208ENST00000470170 PSG6Q00889 435 aa6.51□□□□□ -1.37
COL11A1-208ENST00000470170 SIRT6Q8N6T7 355 aa6.51□□□□□ -1.37
COL11A1-208ENST00000470170 C22orf23Q9BZE7 217 aa6.51□□□□□ -1.37
COL11A1-208ENST00000470170 ZNF518BQ9C0D4 1074 aa6.51□□□□□ -1.37
COL11A1-208ENST00000470170 SPRTNQ9H040 489 aaPredicted RBP6.51□□□□□ -1.37
COL11A1-208ENST00000470170 ASIC5Q9NY37 505 aa6.51□□□□□ -1.37
COL11A1-208ENST00000470170 STK32BQ9NY57 414 aa6.51□□□□□ -1.37
COL11A1-208ENST00000470170 WDR17Q8IZU2 1322 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 TCRBV5S1A1TA0A578 114 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 CAPN8A6NHC0 703 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 CES2O00748 559 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 USP1O94782 785 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 GKP32189 559 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 DAZAP2Q15038 168 aaPredicted RBP6.5□□□□□ -1.37
COL11A1-208ENST00000470170 ODR4Q5SWX8 454 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 BCDIN3DQ7Z5W3 292 aaKnown RBP6.5□□□□□ -1.37
COL11A1-208ENST00000470170 RSPRY1Q96DX4 576 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 FCRL4Q96PJ5 515 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 TMEM60Q9H2L4 133 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 A1CFQ9NQ94 594 aaKnown RBP6.5□□□□□ -1.37
COL11A1-208ENST00000470170 CPNE7Q9UBL6 633 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 LPAR3Q9UBY5 353 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 AMFRQ9UKV5 643 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 CDY1Q9Y6F8 540 aa6.5□□□□□ -1.37
COL11A1-208ENST00000470170 FER1L4A9Z1Z3 1794 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 CYP2D7A0A087X1C5 515 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 UBE2Q2LH0YL09 131 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 PSMD9O00233 223 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 SRGAP2O75044 1071 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 FGAP02671 866 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 CHRM5P08912 532 aaPredicted RBP6.49□□□□□ -1.37
COL11A1-208ENST00000470170 MYCLP12524 364 aaPredicted RBP6.49□□□□□ -1.37
COL11A1-208ENST00000470170 MMP13P45452 471 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 BCAT1P54687 386 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 SUMO3P55854 103 aaPredicted RBP6.49□□□□□ -1.37
COL11A1-208ENST00000470170 CCNIQ14094 377 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 LRRC41Q15345 812 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 CNN3Q15417 329 aaKnown RBP6.49□□□□□ -1.37
COL11A1-208ENST00000470170 CACHD1Q5VU97 1274 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 KCTD20Q7Z5Y7 419 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 MICU3Q86XE3 530 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 C9orf106Q8NAJ2 232 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 SPSB4Q96A44 273 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 ZBTB9Q96C00 473 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 VPS16Q9H269 839 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 TFCP2L1Q9NZI6 479 aa6.49□□□□□ -1.37
COL11A1-208ENST00000470170 DRG1Q9Y295 367 aaKnown RBP6.49□□□□□ -1.37
COL11A1-208ENST00000470170 CFAP69A5D8W1 941 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 FAM227AF5H4B4 570 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 PMPCBO75439 489 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 BCAR3O75815 825 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 RASAL1O95294 804 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 IGKV2-30P06310 120 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 ITGB6P18564 788 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 SUMO2P61956 95 aaKnown RBP6.48□□□□□ -1.37
COL11A1-208ENST00000470170 FAM187BQ17R55 369 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 Q4G0T1 1027 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 CXorf57Q6NSI4 855 aaKnown RBP6.48□□□□□ -1.37
COL11A1-208ENST00000470170 APOA5Q6Q788 366 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 KIAA0319LQ8IZA0 1049 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 PPP1R9BQ96SB3 815 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 XPNPEP3Q9NQH7 507 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 SACM1LQ9NTJ5 587 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 ELOVL5Q9NYP7 299 aa6.48□□□□□ -1.37
COL11A1-208ENST00000470170 DNMT3BQ9UBC3 853 aaKnown RBP6.48□□□□□ -1.37
COL11A1-208ENST00000470170 H7C4K7 107 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 PYCARD-AS1I3L0S3 204 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 PPEF2O14830 753 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 MARCH6O60337 910 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 BMP15O95972 392 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 BRAFP15056 766 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 PRKAR1BP31321 381 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 ITGA8P53708 1063 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 LCE1AQ5T7P2 110 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 SFTPA1Q8IWL2 248 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 SUCLG2Q96I99 432 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 EFHD1Q9BUP0 239 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 WDR26Q9H7D7 661 aa6.47□□□□□ -1.37
COL11A1-208ENST00000470170 TUBA8Q9NY65 449 aaPredicted RBP6.47□□□□□ -1.37
COL11A1-208ENST00000470170 SCAF8Q9UPN6 1271 aaKnown RBP6.47□□□□□ -1.37
COL11A1-208ENST00000470170 TRIM43BA6NCK2 446 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 MBD3L4A6NDZ8 208 aaPredicted RBP6.46□□□□□ -1.38
COL11A1-208ENST00000470170 MBD3L3A6NE82 208 aaPredicted RBP6.46□□□□□ -1.38
COL11A1-208ENST00000470170 A6NNZ2 444 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 RGS10O43665 173 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 GCATO75600 419 aa6.46□□□□□ -1.38
COL11A1-208ENST00000470170 RASSF9O75901 435 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms