RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 CHADO15335 359 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 KIF1CO43896 1103 aaKnown RBP14.26□□□□□ -0.13
BRCA1-209ENST00000470026 RNF8O76064 485 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 MICAL2O94851 1124 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 HMGCRP04035 888 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 GM2AP17900 193 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 ZNF143P52747 638 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-209ENST00000470026 HIRAP54198 1017 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-209ENST00000470026 CDH8P55286 799 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 ANKRD20A2Q5SQ80 823 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 ANKRD20A1Q5TYW2 823 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 ANGEL2Q5VTE6 544 aaKnown RBP14.26□□□□□ -0.13
BRCA1-209ENST00000470026 ANKRD20A3Q5VUR7 823 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 STK32AQ8WU08 396 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 PTPRN2Q92932 1015 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 APOPT1Q96IL0 206 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 NPHS2Q9NP85 383 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 ASNSD1Q9NWL6 643 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 NKX1-2Q9UD57 310 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-209ENST00000470026 ZFP69BQ9UJL9 534 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 PPP2R3BQ9Y5P8 575 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 LTBP3Q9NS15 1303 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 SOCS7O14512 581 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 B4GALT5O43286 388 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 ARIH2O95376 493 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 ATICP31939 592 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 ELK3P41970 407 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 MAGEA6P43360 314 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 MBTD1Q05BQ5 628 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 PRKD1Q15139 912 aaPredicted RBP14.26□□□□□ -0.13
BRCA1-209ENST00000470026 CMPK2Q5EBM0 449 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 WDR78Q5VTH9 848 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 LONP2Q86WA8 852 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 RFWD2Q8NHY2 731 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 SPATA18Q8TC71 538 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 TMEM176AQ96HP8 235 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 SERAC1Q96JX3 654 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 TUBB6Q9BUF5 446 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 NFKBIZQ9BYH8 718 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 RPF1Q9H9Y2 349 aaKnown RBP14.26□□□□□ -0.13
BRCA1-209ENST00000470026 KCNK13Q9HB14 408 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 USP29Q9HBJ7 922 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 HMGXB4Q9UGU5 601 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 PCSK1NQ9UHG2 260 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 CHMP2BQ9UQN3 213 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 LRRC42Q9Y546 428 aa14.26□□□□□ -0.13
BRCA1-209ENST00000470026 KLF11O14901 512 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 PIAS1O75925 651 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 MT-ND3P03897 115 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 TPBGLP0DKB5 382 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 CXCL8P10145 99 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 BASP1P80723 227 aaKnown RBP14.25□□□□□ -0.13
BRCA1-209ENST00000470026 ZNF200P98182 395 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-209ENST00000470026 ROR1Q01973 937 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 LY6KQ17RY6 165 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 FAM47CQ5HY64 1035 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 FAM91A1Q658Y4 838 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 TRNP1Q6NT89 227 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 BZW1Q7L1Q6 419 aaKnown RBP14.25□□□□□ -0.13
BRCA1-209ENST00000470026 MTDHQ86UE4 582 aaKnown RBP14.25□□□□□ -0.13
BRCA1-209ENST00000470026 TMEM192Q8IY95 271 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 CNPY3Q9BT09 278 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 FRMD8Q9BZ67 464 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-209ENST00000470026 FAM124BQ9H5Z6 455 aaPredicted RBP14.25□□□□□ -0.13
BRCA1-209ENST00000470026 SMYD3Q9H7B4 428 aa14.25□□□□□ -0.13
BRCA1-209ENST00000470026 C2CD4BA6NLJ0 364 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 KBTBD13C9JR72 458 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 LIN7AO14910 233 aaPredicted RBP14.24□□□□□ -0.13
BRCA1-209ENST00000470026 LPXNO60711 386 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 NFICP08651 508 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 VDRP11473 427 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 EPHB2P29323 1055 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 PTK7Q13308 1070 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 TFDP2Q14188 446 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 SEPT7Q16181 437 aaKnown RBP14.24□□□□□ -0.13
BRCA1-209ENST00000470026 FAM187BQ17R55 369 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 HSDL1Q3SXM5 330 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 CELF3Q5SZQ8 465 aaKnown RBP14.24□□□□□ -0.13
BRCA1-209ENST00000470026 TREML2Q5T2D2 321 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 ZNF449Q6P9G9 518 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 ILDR2Q71H61 639 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 TRIM50Q86XT4 487 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 HSPH1Q92598 858 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 USP6NLQ92738 828 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 SKA1Q96BD8 255 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 PTCD3Q96EY7 689 aaKnown RBP14.24□□□□□ -0.13
BRCA1-209ENST00000470026 TRIM55Q9BYV6 548 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 C12orf65Q9H3J6 166 aaKnown RBP14.24□□□□□ -0.13
BRCA1-209ENST00000470026 SYNCQ9H7C4 482 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 PAPPA2Q9BXP8 1791 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 ZSWIM8A7E2V4 1837 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 GOLGA8RI6L899 631 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 GPR25O00155 361 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 PEX10O60683 326 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 GPD1P21695 349 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 MARK3P27448 753 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 NRLP54845 237 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 POU5F1BQ06416 359 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 INCA1Q0VD86 236 aa14.24□□□□□ -0.13
BRCA1-209ENST00000470026 FAAP100Q0VG06 881 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms