RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ADAM23O75077 832 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 CAPNS1P04632 268 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 FTH1P19P0C7X4 201 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 ADH5P11766 374 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 TNFRSF4P43489 277 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 LHX1P48742 406 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 PEAR1Q5VY43 1037 aaPredicted RBP20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 OSTM1Q86WC4 334 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 C12orf40Q86WS4 652 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 ADGRF2Q8IZF7 708 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 RGL4Q8IZJ4 473 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 CSGALNACT2Q8N6G5 542 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 LRIG1Q96JA1 1093 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 R3HCC1Q9Y3T6 440 aaKnown RBP20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 CPQQ9Y646 472 aa20.29■□□□□ 0.84
NCKIPSD-209ENST00000470006 ACACAQ13085 2346 aa20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 HCRTO43612 131 aa20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 PFKLP17858 780 aa20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 PLCG1P19174 1290 aa20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 EIF2DP41214 584 aaKnown RBP20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 KIR2DL1P43626 348 aaPredicted RBP20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 ZNF131P52739 623 aa20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 DENND5BQ6ZUT9 1274 aa20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 MDM1Q8TC05 714 aa20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 NOC3LQ8WTT2 800 aaKnown RBP20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 PKMYT1Q99640 499 aa20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 FAM213AQ9BRX8 229 aa20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 CFAP97Q9P2B7 532 aa20.28■□□□□ 0.84
NCKIPSD-209ENST00000470006 ATP2C2O75185 946 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 BDNFP23560 247 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 UBA7P41226 1012 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 WASP42768 502 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 MAGEA11P43364 429 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 PSMC1P62191 440 aaKnown RBP20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 POU5F1Q01860 360 aaKnown RBP20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 CYP27A1Q02318 531 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 MCM6Q14566 821 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 POSTNQ15063 836 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 PLEKHG6Q3KR16 790 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 BTBD8Q5XKL5 378 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 RHBDF2Q6PJF5 856 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 CRELD2Q6UXH1 353 aaPredicted RBP20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 TRMT11Q7Z4G4 463 aaKnown RBP20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 ZNF513Q8N8E2 541 aaPredicted RBP20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 NAT16Q8N8M0 369 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 ADAMTS14Q8WXS8 1223 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 ERLEC1Q96DZ1 483 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 RNF38Q9H0F5 515 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 IKZF4Q9H2S9 585 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 DNAAF2Q9NVR5 837 aaKnown RBP20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 EHD2Q9NZN4 543 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 CALCOCO1Q9P1Z2 691 aa20.27■□□□□ 0.84
NCKIPSD-209ENST00000470006 SMG1Q96Q15 3661 aaKnown RBP20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 USP46P62068 366 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 SLC7A9P82251 487 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 SLC14A1Q13336 389 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 RILPL1Q5EBL4 403 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 CCNI2Q6ZMN8 369 aaPredicted RBP20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 NUDT18Q6ZVK8 323 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 NAXDQ8IW45 347 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 C1orf127Q8N9H9 656 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 TRIML1Q8N9V2 468 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 MYLPFQ96A32 169 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 SPATA17Q96L03 361 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 HSPA12BQ96MM6 686 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 SYT15Q9BQS2 421 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 APOBEC2Q9Y235 224 aaKnown RBP20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 RAXQ9Y2V3 346 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 STYXL1Q9Y6J8 313 aa20.26■□□□□ 0.83
NCKIPSD-209ENST00000470006 PCDH15Q96QU1 1955 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 A0A0A0MRY4 1105 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 ZNF840PA6NDX5 716 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 NDUFS2O75306 463 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 MBL2P11226 248 aaPredicted RBP20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 HOXB2P14652 356 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 GABRG2P18507 467 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 RBP5P82980 135 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 IFRD2Q12894 506 aaPredicted RBP20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 PREPLQ4J6C6 727 aaPredicted RBP20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 LY6G5CQ5SRR4 150 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 VSTM1Q6UX27 236 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 DDX42Q86XP3 938 aaKnown RBP eCLIP20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 TOP6BLQ8N6T0 577 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 LRRC52Q8N7C0 313 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 SAAL1Q96ER3 474 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 GDAP2Q9NXN4 497 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 TBC1D14Q9P2M4 693 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 CYP8B1Q9UNU6 501 aa20.25■□□□□ 0.83
NCKIPSD-209ENST00000470006 FLNBO75369 2602 aaKnown RBP20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 PLXNB3Q9ULL4 1909 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 A0A1W2PQD8 194 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 PDGFRBP09619 1106 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 GNSP15586 552 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 PPP3CCP48454 512 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 WNT7BP56706 349 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 GAD2Q05329 585 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 C10orf76Q5T2E6 689 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 SYCP2LQ5T4T6 812 aa20.24■□□□□ 0.83
NCKIPSD-209ENST00000470006 SDE2Q6IQ49 451 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms