RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 HTATIP2Q9BUP3 242 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 GLT8D2Q9H1C3 349 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 PORCNQ9H237 461 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 NRBP1Q9UHY1 535 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 SCOCQ9UIL1 159 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 TUBD1Q9UJT1 453 aa7.08□□□□□ -1.28
PTCD3-208ENST00000469585 LUC7L2Q9Y383 392 aaKnown RBP7.08□□□□□ -1.28
PTCD3-208ENST00000469585 LOC102724159A0A0B4J2E5 919 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 KLF18A0A0U1RQI7 1052 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 KBTBD13C9JR72 458 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 hCG_1984214I3L0E3 225 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 ZBTB5O15062 677 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 TMEM127O75204 238 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 FSBPO95073 299 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 SNUPNO95149 360 aaKnown RBP7.07□□□□□ -1.28
PTCD3-208ENST00000469585 ZRANB2O95218 330 aaKnown RBP eCLIP7.07□□□□□ -1.289e-6■□□□□ 10.3
PTCD3-208ENST00000469585 GOLGA8HP0CJ92 632 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 CCL5P13501 91 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 C5AR1P21730 350 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 GJA9P57773 515 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 MGAT5Q09328 741 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 GRM4Q14833 912 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 PWP2Q15269 919 aaKnown RBP7.07□□□□□ -1.28
PTCD3-208ENST00000469585 TBR1Q16650 682 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 ZMAT1Q5H9K5 638 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 NT5DC1Q5TFE4 455 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 RNF207Q6ZRF8 634 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 CYB5R4Q7L1T6 521 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 CLEC14AQ86T13 490 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 SKAP1Q86WV1 359 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 KBTBD2Q8IY47 623 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 MB21D2Q8IYB1 491 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-208ENST00000469585 CMTR2Q8IYT2 770 aaKnown RBP7.07□□□□□ -1.28
PTCD3-208ENST00000469585 ADGRF4Q8IZF3 695 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 UNC5BQ8IZJ1 945 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 ZNF713Q8N859 430 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-208ENST00000469585 SYT8Q8NBV8 401 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 PIK3C3Q8NEB9 887 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 ZNF333Q96JL9 665 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 ACE2Q9BYF1 805 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-208ENST00000469585 RHOBTB2Q9BYZ6 727 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 CDH19Q9H159 772 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 OR10A2Q9H208 303 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 RANBP17Q9H2T7 1088 aaKnown RBP7.07□□□□□ -1.28
PTCD3-208ENST00000469585 PDRG1Q9NUG6 133 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 MAP3K20Q9NYL2 800 aaKnown RBP7.07□□□□□ -1.28
PTCD3-208ENST00000469585 TCEAL9Q9UHQ7 104 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 GABRQQ9UN88 632 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 ADAMTS5Q9UNA0 930 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 INVSQ9Y283 1065 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 PCDHA1Q9Y5I3 950 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 GREB1LQ9C091 1923 aaPredicted RBP7.07□□□□□ -1.28
PTCD3-208ENST00000469585 MGAMO43451 1857 aa7.07□□□□□ -1.28
PTCD3-208ENST00000469585 SH2B2O14492 632 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-208ENST00000469585 NDUFS2O75306 463 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 GJB1P08034 283 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 HOXC6P09630 235 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 SNHG28P0DPA3 235 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 RARBP10826 455 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 AKR1A1P14550 325 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 RPS6KB1P23443 525 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 CALML3P27482 149 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 SMARCA1P28370 1054 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 NOVP48745 357 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 SOX10P56693 466 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 HGFACQ04756 655 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 KIAA1755Q5JYT7 1200 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 ARHGEF16Q5VV41 709 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 LCNL1Q6ZST4 164 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 USP30Q70CQ3 517 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 RUFY3Q7L099 469 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 FAM124AQ86V42 546 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 FANCBQ8NB91 859 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 CCDC148Q8NFR7 591 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 DNERQ8NFT8 737 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 PIBF1Q8WXW3 757 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 WASF1Q92558 559 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 LPPQ93052 612 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 FATE1Q969F0 183 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 TM6SF1Q9BZW5 370 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 UBA5Q9GZZ9 404 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.06□□□□□ -1.28
PTCD3-208ENST00000469585 ABHD16BQ9H3Z7 469 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 LY9Q9HBG7 655 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 ZIM2Q9NZV7 527 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 IP6K2Q9UHH9 426 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 ZHX1Q9UKY1 873 aaPredicted RBP7.06□□□□□ -1.28
PTCD3-208ENST00000469585 FAM184BQ9ULE4 1060 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 KIF3AQ9Y496 699 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 SLC4A7Q9Y6M7 1214 aa7.06□□□□□ -1.28
PTCD3-208ENST00000469585 ADAMTS20P59510 1910 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 GCOM1H8Y6P7 765 aaPredicted RBP7.05□□□□□ -1.28
PTCD3-208ENST00000469585 CNMDO75829 334 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 PARNO95453 639 aaKnown RBP7.05□□□□□ -1.28
PTCD3-208ENST00000469585 PGK2P07205 417 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 POLR2MP0CAP2 368 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 ZSCAN22P10073 491 aaPredicted RBP7.05□□□□□ -1.28
PTCD3-208ENST00000469585 MALLQ13021 153 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 NFYCQ13952 458 aa7.05□□□□□ -1.28
PTCD3-208ENST00000469585 TRIM29Q14134 588 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms