RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 MARCH6O60337 910 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 TADA3O75528 432 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 OAZ2O95190 189 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 CFIP05156 583 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 HARSP12081 509 aaKnown RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 KCNE1P15382 129 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 PCSK2P16519 638 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 HMGA1P17096 107 aaKnown RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 OPRD1P41143 372 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 P2RY2P41231 377 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 TXKP42681 527 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 SLC6A11P48066 632 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 EPHB3P54753 998 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 ZXDBP98169 803 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 DNM1Q05193 864 aaKnown RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 TYRO3Q06418 890 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 SSRP1Q08945 709 aaKnown RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 STK3Q13188 491 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 GPR17Q13304 367 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 TOB2Q14106 344 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 KARSQ15046 597 aaKnown RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 TRIP6Q15654 476 aaKnown RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 DCAF4L1Q3SXM0 396 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 USP39Q53GS9 565 aaKnown RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 EFHC2Q5JST6 749 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 SLC23A3Q6PIS1 610 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 PCSK4Q6UW60 755 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 KRT25Q7Z3Z0 450 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 CATSPER3Q86XQ3 398 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 SYT12Q8IV01 421 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 MINDY1Q8N5J2 469 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 DEPTORQ8TB45 409 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 LRRC15Q8TF66 581 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 ADAMTS14Q8WXS8 1223 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 CD101Q93033 1021 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 JAKMIP1Q96N16 626 aaKnown RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 ACO2Q99798 780 aaKnown RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 ADPGKQ9BRR6 497 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 C22orf23Q9BZE7 217 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 HAPLN2Q9GZV7 340 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 TMEM60Q9H2L4 133 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 TTC12Q9H892 705 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-209ENST00000469511 CAPN10Q9HC96 672 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 PILRBQ9UKJ0 227 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 RAI2Q9Y5P3 530 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 SNX14Q9Y5W7 946 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 MYH10P35580 1976 aa5.74□□□□□ -1.49
PTPN4-209ENST00000469511 UNC79Q9P2D8 2635 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 SPTA1P02549 2419 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 TRABD2BA6NFA1 517 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 UPK3BL1B0FP48 263 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 UPK3BL2E5RIL1 263 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 LCE2BO14633 110 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 GJB3O75712 270 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 DEXIO95424 95 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 THBS1P07996 1170 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 KRT10P13645 584 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 CYP11B2P19099 503 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 DRD1P21728 446 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 RPS6KB1P23443 525 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 MAOBP27338 520 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 MARCKSP29966 332 aaPredicted RBP5.73□□□□□ -1.49
PTPN4-209ENST00000469511 HSPA4P34932 840 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 TNFSF9P41273 254 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 NAMPTP43490 491 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 ALDH1A3P47895 512 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 CLDN6P56747 220 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 NLRP12P59046 1061 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 YWHAHQ04917 246 aaPredicted RBP5.73□□□□□ -1.49
PTPN4-209ENST00000469511 EHHADHQ08426 723 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 C19orf57Q0VDD7 668 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 LMAN2Q12907 356 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 UBAP2LQ14157 1087 aaKnown RBP5.73□□□□□ -1.49
PTPN4-209ENST00000469511 CRY1Q16526 586 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 CCDC142Q17RM4 750 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 SCARA3Q6AZY7 606 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 FIGNL1Q6PIW4 674 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 C12orf40Q86WS4 652 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 SLC41A1Q8IVJ1 513 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 ZNF843Q8N446 348 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 ALLCQ8N6M5 410 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 TXNDC5Q8NBS9 432 aaKnown RBP5.73□□□□□ -1.49
PTPN4-209ENST00000469511 PIP4K2CQ8TBX8 421 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 KCNB2Q92953 911 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 CNOT6LQ96LI5 555 aaKnown RBP5.73□□□□□ -1.49
PTPN4-209ENST00000469511 ACAP3Q96P50 834 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 MTMR9Q96QG7 549 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 SEPT5Q99719 369 aaPredicted RBP5.73□□□□□ -1.49
PTPN4-209ENST00000469511 CCDC94Q9BW85 323 aaPredicted RBP5.73□□□□□ -1.49
PTPN4-209ENST00000469511 NUSAP1Q9BXS6 441 aaKnown RBP5.73□□□□□ -1.49
PTPN4-209ENST00000469511 IL21RQ9HBE5 538 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 TMLHEQ9NVH6 421 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 THG1LQ9NWX6 298 aaKnown RBP5.73□□□□□ -1.49
PTPN4-209ENST00000469511 CNTN3Q9P232 1028 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 GMPR2Q9P2T1 348 aaKnown RBP5.73□□□□□ -1.49
PTPN4-209ENST00000469511 HCN2Q9UL51 889 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 TPCN1Q9ULQ1 816 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 PCDHA12Q9UN75 941 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 SLC6A14Q9UN76 642 aa5.73□□□□□ -1.49
PTPN4-209ENST00000469511 TNFSF13BQ9Y275 285 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms