RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 IKBKGQ9Y6K9 419 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 KIAA1217Q5T5P2 1943 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 B4GALT5O43286 388 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 LUC7L3O95232 432 aaKnown RBP12.62□□□□□ -0.39
VARS2-205ENST00000469358 INHBAP08476 426 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 GMPRP36959 345 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 SERPINB4P48594 390 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 PRKG1Q13976 671 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 ZNF699Q32M78 642 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 LRRC38Q5VT99 294 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 ARID3BQ8IVW6 561 aaPredicted RBP12.62□□□□□ -0.39
VARS2-205ENST00000469358 PDCD7Q8N8D1 485 aaKnown RBP12.62□□□□□ -0.39
VARS2-205ENST00000469358 SKA1Q96BD8 255 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 FAM161BQ96MY7 647 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 MAGEB5Q9BZ81 275 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 NIF3L1Q9GZT8 377 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 PIH1D1Q9NWS0 290 aaKnown RBP12.62□□□□□ -0.39
VARS2-205ENST00000469358 SLC17A6Q9P2U8 582 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 HEY1Q9Y5J3 304 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 USP1O94782 785 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 ARL2P36404 184 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 ASPAP45381 313 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 NEK3P51956 506 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 CDK16Q00536 496 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 PRKD1Q15139 912 aaPredicted RBP12.62□□□□□ -0.39
VARS2-205ENST00000469358 RASA2Q15283 850 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 CEP128Q6ZU80 1094 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 BBS12Q6ZW61 710 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 TRAPPC12Q8WVT3 735 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 SRPK1Q96SB4 655 aaKnown RBP12.62□□□□□ -0.39
VARS2-205ENST00000469358 MMP19Q99542 508 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 DHX33Q9H6R0 707 aaKnown RBP12.62□□□□□ -0.39
VARS2-205ENST00000469358 TLE6Q9H808 572 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 SMYD2Q9NRG4 433 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 RAB6BQ9NRW1 208 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 LNPEPQ9UIQ6 1025 aa12.62□□□□□ -0.39
VARS2-205ENST00000469358 SIGLEC16A6NMB1 481 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 MEI4A8MW99 385 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 B2RBV5 119 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 ZNF200P98182 395 aaPredicted RBP12.61□□□□□ -0.39
VARS2-205ENST00000469358 KLHL38Q2WGJ6 581 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 FAM83AQ86UY5 434 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 LMNTD2Q8IXW0 634 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 OXNAD1Q96HP4 312 aaPredicted RBP12.61□□□□□ -0.39
VARS2-205ENST00000469358 CYTH2Q99418 400 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 SDCBP2Q9H190 292 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 VPS11Q9H270 941 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 MYOZ2Q9NPC6 264 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.61□□□□□ -0.39
VARS2-205ENST00000469358 PPARGC1AQ9UBK2 798 aaKnown RBP12.61□□□□□ -0.39
VARS2-205ENST00000469358 ZNF214Q9UL59 606 aaPredicted RBP12.61□□□□□ -0.39
VARS2-205ENST00000469358 H7C0C1 242 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 UBTFL6P0CB48 400 aaPredicted RBP12.61□□□□□ -0.39
VARS2-205ENST00000469358 NAMPTP43490 491 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 ATP5OP48047 213 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 RTP1P59025 263 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 UNC5BQ8IZJ1 945 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 FAF2Q96CS3 445 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 SHCBP1LQ9BZQ2 653 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 ZCWPW1Q9H0M4 648 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 SMYD3Q9H7B4 428 aa12.61□□□□□ -0.39
VARS2-205ENST00000469358 DDX56Q9NY93 547 aaKnown RBP12.61□□□□□ -0.39
VARS2-205ENST00000469358 E2F8A0AVK6 867 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 FAM189A1O60320 539 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 SMIM24O75264 130 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 PSMG1O95456 288 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 F7P08709 466 aaPredicted RBP12.6□□□□□ -0.39
VARS2-205ENST00000469358 PGM1P36871 562 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 ALDH18A1P54886 795 aaKnown RBP12.6□□□□□ -0.39
VARS2-205ENST00000469358 CDH6P55285 790 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 KLC1Q07866 573 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 BST1Q10588 318 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 TSNAXIP1Q2TAA8 658 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 CIAPIN1Q6FI81 312 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 SLFN12LQ6IEE8 588 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 TRNP1Q6NT89 227 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 BRSK2Q8IWQ3 736 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 RDM1Q8NG50 284 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 PCYT2Q99447 389 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 SAR1AQ9NR31 198 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 AFG3L2Q9Y4W6 797 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 CENPFP49454 3210 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 SP100P23497 879 aaPredicted RBP12.6□□□□□ -0.39
VARS2-205ENST00000469358 UBAP2LQ14157 1087 aaKnown RBP12.6□□□□□ -0.39
VARS2-205ENST00000469358 SGSM1Q2NKQ1 1148 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 SCYL2Q6P3W7 929 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 TRMT10BQ6PF06 316 aaKnown RBP12.6□□□□□ -0.39
VARS2-205ENST00000469358 LRRC74BQ6ZQY2 392 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 SH2D5Q6ZV89 423 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 RNF149Q8NC42 400 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 APOPT1Q96IL0 206 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 EBF4Q9BQW3 602 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 XYLT2Q9H1B5 865 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 R3HDMLQ9H3Y0 253 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 PLAC1Q9HBJ0 212 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.6□□□□□ -0.392e-6■■■■■ 31.6
VARS2-205ENST00000469358 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 SPATA31C2B4DYI2 1134 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 E7ESA3 106 aa12.6□□□□□ -0.39
VARS2-205ENST00000469358 MCF2LO15068 1137 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms