RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 MMEL1Q495T6 779 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 KHDC1Q4VXA5 237 aaKnown RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 TNNI3KQ59H18 835 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 EPHA10Q5JZY3 1008 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 TMEM63BQ5T3F8 832 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 DUS1LQ6P1R4 473 aaKnown RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 INTS5Q6P9B9 1019 aaKnown RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 KLHDC10Q6PID8 442 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 IZUMO2Q6UXV1 221 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 MCM10Q7L590 875 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 UBE2Q1Q7Z7E8 422 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ITIH5Q86UX2 942 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 LRRC6Q86X45 466 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 PDSS2Q86YH6 399 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 TDRPQ86YL5 185 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 RELL1Q8IUW5 271 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 DIS3L2Q8IYB7 885 aaKnown RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ANGPTL6Q8NI99 470 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF420Q8TAQ5 688 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 GIPC3Q8TF64 312 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 CHPT1Q8WUD6 406 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 LPIN2Q92539 896 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ESR2Q92731 530 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 P2RX5Q93086 422 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 TRIM63Q969Q1 353 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 TMA16Q96EY4 203 aaKnown RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 TSG101Q99816 390 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 CTRCQ99895 268 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 TMPRSS13Q9BYE2 586 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 STK33Q9BYT3 514 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 NDEL1Q9GZM8 345 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 KIAA1683Q9H0B3 1180 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 KLC2Q9H0B6 622 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 NT5C3AQ9H0P0 336 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 FAM96AQ9H5X1 160 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 MLXIPQ9HAP2 919 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 LGR6Q9HBX8 967 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ZFYVE28Q9HCC9 887 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 VTA1Q9NP79 307 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 RIC8AQ9NPQ8 531 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 DISC1Q9NRI5 854 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ZDHHC18Q9NUE0 388 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 AGPAT5Q9NUQ2 364 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ARHGEF38Q9NXL2 777 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 RRN3Q9NYV6 651 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 HACD3Q9P035 362 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 PIM2Q9P1W9 311 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 WHRNQ9P202 907 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ARHGAP20Q9P2F6 1191 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 ANKFY1Q9P2R3 1169 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 SEL1LQ9UBV2 794 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 PCYOX1Q9UHG3 505 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 HAO1Q9UJM8 370 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 AMFRQ9UKV5 643 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 CNOT11Q9UKZ1 510 aaKnown RBP5.08□□□□□ -1.6
SF3B1-207ENST00000468925 HIF3AQ9Y2N7 669 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 COQ6Q9Y2Z9 468 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 AP4S1Q9Y587 144 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 SPO11Q9Y5K1 396 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 FPGT-TNNI3KV9GXZ4 949 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 MON2Q7Z3U7 1717 aa5.08□□□□□ -1.6
SF3B1-207ENST00000468925 WNK3Q9BYP7 1800 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ERVV-2B6SEH9 535 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 H0Y3Z8 333 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 H0YC42 278 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 RGS13O14921 159 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ZNF263O14978 683 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 VILLO15195 856 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 FOXN1O15353 648 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 TSPAN6O43657 245 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 DKC1O60832 514 aaKnown RBP eCLIP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 EDF1O60869 148 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ENTPD5O75356 428 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 TIAF1O95411 115 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 SHBGP04278 402 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 NTRK1P04629 796 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ABHD2P08910 425 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 UBTFL6P0CB48 400 aaPredicted RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ZCCHC18P0CG32 403 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 BRAFP15056 766 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ITIH2P19823 946 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ENDOUP21128 410 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ACAT1P24752 427 aaKnown RBP5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CCNCP24863 283 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 NFKBIAP25963 317 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 EPHB2P29323 1055 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 GNA11P29992 359 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CDC25AP30304 524 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CXCR5P32302 372 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 HSPA1LP34931 641 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ADMP35318 185 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ETFBP38117 255 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 CCNFP41002 786 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 PRCPP42785 496 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 AFMP43652 599 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 ACADSBP45954 432 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 IFNAR2P48551 515 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 GSSP48637 474 aa5.07□□□□□ -1.6
SF3B1-207ENST00000468925 GPC3P51654 580 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms