RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 FILIP1Q7Z7B0 1213 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 SCFD1Q8WVM8 642 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 ELOVL4Q9GZR5 314 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 RNF38Q9H0F5 515 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 DPEP3Q9H4B8 488 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 SMPD4Q9NXE4 827 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 CPQQ9Y646 472 aa18.39■□□□□ 0.53
TRIM56-203ENST00000467847 MYOFQ9NZM1 2061 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 BAHCC1Q9P281 2608 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 ABCA7Q8IZY2 2146 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 A8MXQ7 604 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 K7EQS6 105 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 YEATS4O95619 227 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 CYP17A1P05093 508 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 FAM163BP0C2L3 166 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 GBP1P32455 592 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 CACNA2D1P54289 1103 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 MYL6P60660 151 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 CREB5Q02930 508 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 IFRD2Q12894 506 aaPredicted RBP18.38■□□□□ 0.53
TRIM56-203ENST00000467847 TAF10Q12962 218 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 COL9A2Q14055 689 aaPredicted RBP18.38■□□□□ 0.53
TRIM56-203ENST00000467847 UNC13DQ70J99 1090 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 USP33Q8TEY7 942 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 SLITRK1Q96PX8 696 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 ZNF518BQ9C0D4 1074 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 MAGEF1Q9HAY2 307 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 NXF1Q9UBU9 619 aaKnown RBP18.38■□□□□ 0.53
TRIM56-203ENST00000467847 THADAQ6YHU6 1953 aa18.38■□□□□ 0.53
TRIM56-203ENST00000467847 SLC9A3R1O14745 358 aaPredicted RBP18.37■□□□□ 0.53
TRIM56-203ENST00000467847 SCAMP3O14828 347 aaKnown RBP18.37■□□□□ 0.53
TRIM56-203ENST00000467847 TM4SF5O14894 197 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 POLR2DO15514 142 aaKnown RBP18.37■□□□□ 0.53
TRIM56-203ENST00000467847 PHACTR2O75167 634 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 OLFM2O95897 454 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 OAS1P00973 400 aaKnown RBP18.37■□□□□ 0.53
TRIM56-203ENST00000467847 CASP1P29466 404 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 EHHADHQ08426 723 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 GAB4Q2WGN9 574 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 USP39Q53GS9 565 aaKnown RBP18.37■□□□□ 0.53
TRIM56-203ENST00000467847 N4BP2L1Q5TBK1 243 aaPredicted RBP18.37■□□□□ 0.53
TRIM56-203ENST00000467847 FOXD4L5Q5VV16 416 aaPredicted RBP18.37■□□□□ 0.53
TRIM56-203ENST00000467847 TCEAL6Q6IPX3 200 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 KIAA1958Q8N8K9 716 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 B3GALNT2Q8NCR0 500 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 FOXD4L4Q8WXT5 416 aaPredicted RBP18.37■□□□□ 0.53
TRIM56-203ENST00000467847 ZNF516Q92618 1163 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 TCEAL3Q969E4 200 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 TPSD1Q9BZJ3 242 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 BLZF1Q9H2G9 400 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 TMEM30AQ9NV96 361 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 CFAP97Q9P2B7 532 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 INVSQ9Y283 1065 aa18.37■□□□□ 0.53
TRIM56-203ENST00000467847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.36■□□□□ 0.53
TRIM56-203ENST00000467847 CLDN5O00501 218 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 CLSTN1O94985 981 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 STAU1O95793 577 aaKnown RBP18.36■□□□□ 0.53
TRIM56-203ENST00000467847 PMLP29590 882 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 ATICP31939 592 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 DHCR24Q15392 516 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 RNF43Q68DV7 783 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 ANO7Q6IWH7 933 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 DDX42Q86XP3 938 aaKnown RBP eCLIP18.36■□□□□ 0.53
TRIM56-203ENST00000467847 ADGRG2Q8IZP9 1017 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 CCDC33Q8N5R6 958 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 SYAP1Q96A49 352 aaPredicted RBP18.36■□□□□ 0.53
TRIM56-203ENST00000467847 B3GNT5Q9BYG0 378 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 GZF1Q9H116 711 aaPredicted RBP18.36■□□□□ 0.53
TRIM56-203ENST00000467847 XYLT2Q9H1B5 865 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 SLC39A2Q9NP94 309 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 CGNQ9P2M7 1197 aaKnown RBP18.36■□□□□ 0.53
TRIM56-203ENST00000467847 MMP17Q9ULZ9 603 aa18.36■□□□□ 0.53
TRIM56-203ENST00000467847 ATRXP46100 2492 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 ATP8B3O60423 1300 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 BCLAF3A2AJT9 711 aaKnown RBP18.35■□□□□ 0.53
TRIM56-203ENST00000467847 EXOC3O60645 756 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 CAVIN2O95810 425 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 ADH1CP00326 375 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 MBL2P11226 248 aaPredicted RBP18.35■□□□□ 0.53
TRIM56-203ENST00000467847 YWHAQP27348 245 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 CASP4P49662 377 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 BIRC3Q13489 604 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 KNOP1Q1ED39 458 aaKnown RBP18.35■□□□□ 0.53
TRIM56-203ENST00000467847 BMT2Q1RMZ1 405 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 FOXD4L6Q3SYB3 417 aaPredicted RBP18.35■□□□□ 0.53
TRIM56-203ENST00000467847 FOXD4L3Q6VB84 417 aaPredicted RBP18.35■□□□□ 0.53
TRIM56-203ENST00000467847 C11orf74Q86VG3 221 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 RASSF3Q86WH2 238 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 TTC30AQ86WT1 665 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 C12orf56Q8IXR9 622 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 NUP93Q8N1F7 819 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 PDZD8Q8NEN9 1154 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 FBXO32Q969P5 355 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 SMYD3Q9H7B4 428 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 CEP295Q9C0D2 2601 aa18.35■□□□□ 0.53
TRIM56-203ENST00000467847 MYH10P35580 1976 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 ANTXRLA6NF34 631 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 RTN3O95197 1032 aaPredicted RBP18.34■□□□□ 0.53
TRIM56-203ENST00000467847 AFMP43652 599 aa18.34■□□□□ 0.53
TRIM56-203ENST00000467847 SLC6A11P48066 632 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms